Gene Information

Name : ribD (HI0944)
Accession : NP_439104.1
Strain : Haemophilus influenzae Rd KW20
Genome accession: NC_000907
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 1003367 - 1004485 bp
Length : 1119 bp
Strand : +
Note : similar to SP:P25539 GB:X64395 PID:581147 GB:U00096 PID:1773098

DNA sequence :
ATGCTTGAATTTTCCTCACAAGATTGCGTATTTATGCAACGTGCCTTAGATTTGGCAGCCAAAGGTCAATATACCACTAC
ACCGAACCCATCGGTGGGATGCGTATTGGTTAAAAATGGTGAAATTGTGGGGGAGGGCTTTCATTTTAAGGCAGGACAAC
CTCATGCTGAACGCGTTGCCTTAGCTCAAGCTGGTGAAAATGCTAAAGGAGCAACCGCTTACGTCACCTTAGAGCCTTGC
GCTCATTATGGTCGCACACCACCTTGTGCATTAGGATTAATTGAGGCGGGCGTAGTGAAAGTCATTGCGGCTATGCAAGA
TCCAAATCCTCAAGTCGCAGGAAAAGGTTTGAAAATGTTGTCTGATGCCGGTATCGAAAGTACGGTGAATTTATTGAACG
ATCAAGCGGAAAAAATAAATAAAGGTTTTTTAAAACGAATGCGTCAAGGTATGCCTTTTGTTCAACTAAAACTTGCCATG
AGTTTAGATGGACGAACTGCAATGGCAAGTGGAGAAAGTAAATGGATTACGGGCCCAGATGCTCGTTCGGACGTACAAAA
AATGCGAGCAAAATCATCCGCACTTTTATCTACTTCCACAACAGTCATTGCAGATGATCCAAGCCTTAATGTACGCTGGG
ACGAATTTCCTGAAAATCTTAAAACAGAATATAAAAAAGAATGGCTTCGCCAGCCTGTGCGAGTCATTTTAGATTCACAA
CATCGCATTCAGCCGACTCATAAACTTTTTTTAACCCATTCTCCCGTTTGGTTAGTCTCTAGTGAGCCACGAGATTTAAC
AGGCTTTCCTGATTTTTGTGAACAAATTATTTTTCCGAAAGAAAATTTACTAAAAGAATTAATGCGAGAACTGGGAAAAC
GACAAATCAATACCCTTTGGGTAGAAGCTGGAGCAAATTTATCGGGCAGTTTAATTGATGCGAAATTAGTGGATGAATTG
ATTATTTACATTGCGCCAAAATTACTTGGAGACAATGCTCGTGGTCTATGCCAATTACCGAATTTAACTAAACTTGCTGA
TGCACCATTATGGCAACTCAATGAATTAGAACAAATCGGTGACGATATAAAATTAACTTACACACCGAAAGGAGTCTAA

Protein sequence :
MLEFSSQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGENAKGATAYVTLEPC
AHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIESTVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAM
SLDGRTAMASGESKWITGPDARSDVQKMRAKSSALLSTSTTVIADDPSLNVRWDEFPENLKTEYKKEWLRQPVRVILDSQ
HRIQPTHKLFLTHSPVWLVSSEPRDLTGFPDFCEQIIFPKENLLKELMRELGKRQINTLWVEAGANLSGSLIDAKLVDEL
IIYIAPKLLGDNARGLCQLPNLTKLADAPLWQLNELEQIGDDIKLTYTPKGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 8e-63 50
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 8e-63 50