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Name : mutS (HI0707) Accession : NP_438865.1 Strain : Haemophilus influenzae Rd KW20 Genome accession: NC_000907 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 751161 - 753746 bp Length : 2586 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGATTTCCGAAGAAAATTTCCAACAACATACGCCAATGATGCAGCAATATCTAAAACTCAAAGCGGAGAATCCAGATAT TTTGTTGTTTTATCGCATGGGGGATTTTTACGAGTTGTTTTATGACGATGCGAAAAAAGCGGCGGCATTGTTGGATATTT CTTTGACGAAACGAGGTCAATCTGCAGGACAGCCCATTCCGATGGCAGGAATGCCTTATCATGCAGTGGAAGGTTATTTA GCAAAATTAGTGCAGTTAGGCGAATCTGTGGCGATTTGCGAACAGATTGGCGATCCAACGACGAGTAAAGGACCAGTGGA ACGTCAAATTGTGCGAATTGTTACACCTGGGACAGTAAGCGATGAAGCGCTTTTGCCTGAACGCCAAGACAATCTGATTG CTGCGGTATATCAAGAGAAAGAAAAATTTGGATTAGCCACTTTAGATATGACCTCTGGCCGTTTTCAGCTTTGTGAACCT GCGGACAAAGAAACTTTGCGTGCGGAATTGCAACGTATTGCACCTGTGGAATTGCTTTATTGTGAAGAATTTAATGAAAT GGCTGCGATTGAACATTGTAAGGGATTACGCCGTCGCCCGATTTGGGAATTTGAACTTAGCACCGCCATTACGTTATTAA ATCGTCAATTTGGCACAAAAGATTTACGTGCCTTTGGTGTGGAAAAATCCCCTCTAGGCTTAAGTGCGGCTGGTTGTTTA TTGCAATATGCAAAAGAAACGCAACGTACCGCATTACCCCATATTCAAAGCATTAGCTTGATTCAAAATCAAGACTGCAT TCAGTTAGATGCCGCCACGCGCAGAAATCTTGAATTAACACAAAATCTTGCAGGTGGCACAGAAAATACGCTAGCGTCTG TATTGGATAAATGCGTCACGCCAATGGGCAGTCGCTTATTGAAACGTTGGATTCATCAGCCTGTTCGTGATGTGGAAAAA TTAAAACAACGCCAACAATCGATTGCGGAAATTCTGAATTTTGATTTAGTCGATGAACTTCAGCCTTATTTGCAATTAGT CGGTGATATGGAGCGTATTTTGGCACGTGTTGCGCTACGTTCAGCACGTCCTCGCGATCTCACTCGCTTACGCACGGCGT TAGAACAAATTCCAGCATTACGCGCGATTGTGCAACAAAAAACACCGCCATTTTTAACCGCACTTTTCAGCCAAATTGCT GATTTCAGCGAGCAGTGCGATTTATTGCAACGTGCATTGATTGAAACGCCTCCGCTTTTAATCCGTGATGGTGGCGTGAT TGCTGAAGGATACAATGCAGAGTTAGACGAATGGCGTATGCTCTCTGATGGTGCAACTCAATATTTGGAAAACCTAGAAA AACGTGAGCGTGAAAGCACAGGCATTGATACGCTAAAAATCGGTTTTAATGCAGTGCATGGTTATTACATTCAAATTAGC CAAGGCCAAGCACATAAAGCACCTATTCATTATGTTCGCCGTCAAACCTTGAAAAATGCAGAGCGTTATATTATTCCCGA ACTCAAAGAATATGAAGACAAAGTGCTGAAATCAAAAGGCGCAGCGTTAGCATTAGAAAAGCAACTTTACGATGAATTAT TTGATTTATTATTACCGCACTTAGGTTCATTGCAACTGGCGAGCCTCGCACTTTCTGAATTGGATGTATTGGTCAATCTT GCCGAGCGCGCAGACACCCTCAATTACGTGATGCCAACATTCTGTGATGAAGTGAGTGTGAAAATTAAAAATGGTCGCCA TCCTGTTGTGGAACAAGTATTGAAAGATCCTTTCATCGCCAACCCAGTGGAACTCAATCACAATCGTCATTTATTAGTTA TCACTGGGCCAAATATGGGCGGTAAAAGCACTTATATGCGCCAGACCGCATTAATTACATTGCTGGCGTATATCGGCAGT TTTGTGCCAGCAGACAGCGCGCGAATTGGGCCGATTGATCGTATTTTCACTCGAATTGGTGCGTCTGATGATTTAGCCTC GGGGCGTTCAACCTTTATGGTGGAAATGACGGAAATGGCAAATATTCTTCATCAAGCTACAGCGCAAAGTCTCGTGCTTA TTGATGAAATTGGTCGTGGTACATCCACTTATGATGGCTTATCCTTAGCTTGGGCTTGTGCGGAATGGTTATCCAAAAAA ATCCGCTCGCTTACATTATTTGCCACCCATTATTTTGAATTAACCGCATTGCCAGAACAGCTAGAAGGCATTGCCAATAT TCATTTAGATGCCCTTGAGCATAACAACACCATCGCCTTTATGCACGCCGTACAAAATGGCGCAGCAAGTAAAAGTTATG GTTTGGCAGTCGCGGCTTTGGCAGGCGTGCCACAATCCGTCATTAAACTAGCAAAGCAGAAATTGACACAATTAGAAAAA AACTCAAGCTATTCAGCCGAACAGCAAATTCAAGCGTTGCGTGAAGCCAATCACAATCAGGGCGAATTATTCTTTGAACA AGAAACGGATGCACTAAGAGAGGCTATTGAAAAGCTGGATCCTGATGATTTAAGCCCTAAACAAGCCTTGGCGTATTTGT ATCAGTTAAAGAAAATGGTGGGGTAA Protein sequence : MISEENFQQHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKKAAALLDISLTKRGQSAGQPIPMAGMPYHAVEGYL AKLVQLGESVAICEQIGDPTTSKGPVERQIVRIVTPGTVSDEALLPERQDNLIAAVYQEKEKFGLATLDMTSGRFQLCEP ADKETLRAELQRIAPVELLYCEEFNEMAAIEHCKGLRRRPIWEFELSTAITLLNRQFGTKDLRAFGVEKSPLGLSAAGCL LQYAKETQRTALPHIQSISLIQNQDCIQLDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEK LKQRQQSIAEILNFDLVDELQPYLQLVGDMERILARVALRSARPRDLTRLRTALEQIPALRAIVQQKTPPFLTALFSQIA DFSEQCDLLQRALIETPPLLIRDGGVIAEGYNAELDEWRMLSDGATQYLENLEKRERESTGIDTLKIGFNAVHGYYIQIS QGQAHKAPIHYVRRQTLKNAERYIIPELKEYEDKVLKSKGAALALEKQLYDELFDLLLPHLGSLQLASLALSELDVLVNL AERADTLNYVMPTFCDEVSVKIKNGRHPVVEQVLKDPFIANPVELNHNRHLLVITGPNMGGKSTYMRQTALITLLAYIGS FVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLVLIDEIGRGTSTYDGLSLAWACAEWLSKK IRSLTLFATHYFELTALPEQLEGIANIHLDALEHNNTIAFMHAVQNGAASKSYGLAVAALAGVPQSVIKLAKQKLTQLEK NSSYSAEQQIQALREANHNQGELFFEQETDALREAIEKLDPDDLSPKQALAYLYQLKKMVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | NP_438865.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 71 |
