Gene Information

Name : yfeA (HI0362)
Accession : NP_438524.1
Strain : Haemophilus influenzae Rd KW20
Genome accession: NC_000907
Putative virulence/resistance : Virulence
Product : iron-chelated ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 386402 - 387283 bp
Length : 882 bp
Strand : -
Note : similar to PID:1245464

DNA sequence :
ATGCGAAATTCATTCAAAATTATGACCGCACTTGCACTTGGTTTATTTGCAATGCAAGCTAATGCAAAATTCAAAGTTGT
TACCACCTTCACCGTGATTCAAGATATTGCGCAAAATGTGGCAGGCAATGCGGCAACAGTGGAATCTATTACCAAACCAG
GTGCTGAAATTCACGAATATGAACCAACGCCAAAAGACATTGTAAAAGCACAATCTGCTGATTTAATTTTATGGAACGGC
TTAAATTTAGAACGTTGGTTTGAGCGTTTCTTCCAAAATGTTAAAGATAAACCTGCTGTGGTAGTAACAGAAGGTATTCA
ACCATTATCTATTTATGAAGGCCCGTATAAAGATGCGCCTAATCCACACGCTTGGATGTCGCCATCTAATGCTTTAATTT
ATATTGAAAATATTAAGAATGCGTTAGTGAAATACGATCCACAAAATGCAGCTGTGTATGAAAAAAATGCCGCTGACTAT
GCTCAAAAAATTAAACAACTTGATGAACCGCTTCGTGCAAAATTAGCACAAATTCCAGAAGCGCAACGCTGGCTTGTAAC
AAGTGAAGGTGCTTTCAGTTATTTGGCGAAAGATTACAACTTAAAAGAAGGTTATTTATGGCCAATCAATGCTGAACAAC
AAGGCACACCACAACAAGTGCGTAAAGTGATTGATTTAGTTCGTAAAAACAATATTCCAGTTGTGTTTAGTGAAAGTACA
ATTTCAGCCAAACCTGCACAACAAGTAGCTAAAGAAAGTGGTGCAAAATACGGTGGCGTATTGTACGTTGATTCACTTTC
TGCGAAAAACGGCCCTGTGCCAACTTATATTGATTTGCTTAACGTCACTGTATCAACTATTGTTAAAGGATTCGGAAAAT
AA

Protein sequence :
MRNSFKIMTALALGLFAMQANAKFKVVTTFTVIQDIAQNVAGNAATVESITKPGAEIHEYEPTPKDIVKAQSADLILWNG
LNLERWFERFFQNVKDKPAVVVTEGIQPLSIYEGPYKDAPNPHAWMSPSNALIYIENIKNALVKYDPQNAAVYEKNAADY
AQKIKQLDEPLRAKLAQIPEAQRWLVTSEGAFSYLAKDYNLKEGYLWPINAEQQGTPQQVRKVIDLVRKNNIPVVFSEST
ISAKPAQQVAKESGAKYGGVLYVDSLSAKNGPVPTYIDLLNVTVSTIVKGFGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-94 68
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-94 68
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-94 68
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-94 68
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-94 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA NP_438524.1 iron-chelated ABC transporter substrate-binding protein BAC0439 Protein 2e-102 74
yfeA NP_438524.1 iron-chelated ABC transporter substrate-binding protein BAC0349 Protein 1e-94 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA NP_438524.1 iron-chelated ABC transporter substrate-binding protein VFG0525 Protein 1e-94 68