Gene Information

Name : yfeC (HI0360)
Accession : NP_438522.1
Strain : Haemophilus influenzae Rd KW20
Genome accession: NC_000907
Putative virulence/resistance : Virulence
Product : iron (chelated) ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 384630 - 385478 bp
Length : 849 bp
Strand : -
Note : similar to PID:1245464 SP:Q56954 PID:1245466

DNA sequence : 
ATGTTAGATTTATTGCTTGAACCTTTTTCCTATGATTATATGCTCAAGGCGATGATTTTGAGTACCGCAGTGGGTGGCAT
TTGTGCTTTTTTGTCTTCATATTTAATGCTTAAAGGCTGGTCTCTAATTGGTGATGCACTTTCCCATTCTGTCGTACCCG
GTGTTGCAATTGCCTATGCTTTTGCGTTGCCTTATGCACTTGGTGCATTTTTTGCCGGAATTTTAGCCGCACTTTCCATT
CTTTGGATTAAATCTATTTCTAAACTGAAAGAAGATGCCGTTATCGGGTTTATTTTCAGTACTTTCTTTGCATTAGGTTT
GTTAATCGTTTCTTTAAATCCAACCGCAGTAAATGTGCAAAATATCATTTTAGGTAATATTTTAGGCATTGCTGATGAAG
ATATTTATCAAGTGGCAATTATCATCGGTGTTTGTTTAGTATTGCTTTTATTATTTTGGAAGGATTTACTGCTGATTTTT
TTTGATGAAACACAAGCGATTACAGTCGGTCTTTCTCCATTATTTTATAAAATTTTATTTTTCACATTATTGAGTGCTTG
TGTGGTTGCTGCCTTGCAAACTGTAGGCGCGATTTTAGTGATTGCGATGGTCGTTACCCCAGGTGCGACAGCATATTTAC
TCACAGATAAATTCAAAACCTTGTCAATCATCGCTATTATTTTAGGGGCGGTGACAAGTTTTGTTGGTGTTTATATTAGC
TATTATTTAGATGGTGCCACAGGCGGTGTGATTGTGACATTGCAAACATTATTGTTTTTAGTCGCTTTCTTATTTTCACC
AAAATATGGCTTATTAACTCGTAATAAAAAGGCGGTAGAAAATGTTTGA

Protein sequence : 
MLDLLLEPFSYDYMLKAMILSTAVGGICAFLSSYLMLKGWSLIGDALSHSVVPGVAIAYAFALPYALGAFFAGILAALSI
LWIKSISKLKEDAVIGFIFSTFFALGLLIVSLNPTAVNVQNIILGNILGIADEDIYQVAIIIGVCLVLLLLFWKDLLLIF
FDETQAITVGLSPLFYKILFFTLLSACVVAALQTVGAILVIAMVVTPGATAYLLTDKFKTLSIIAIILGAVTSFVGVYIS
YYLDGATGGVIVTLQTLLFLVAFLFSPKYGLLTRNKKAVENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-66 64
sitC NP_461784.1 permease Virulence SPI-1 Protein 5e-66 64
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-66 64
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-66 64
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 4e-66 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC NP_438522.1 iron (chelated) ABC transporter permease BAC0441 Protein 6e-72 72
yfeC NP_438522.1 iron (chelated) ABC transporter permease BAC0351 Protein 2e-66 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC NP_438522.1 iron (chelated) ABC transporter permease VFG0527 Protein 2e-66 64