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Name : xerD (HI0309) Accession : NP_438476.1 Strain : Haemophilus influenzae Rd KW20 Genome accession: NC_000907 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 342649 - 343542 bp Length : 894 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGAAAAATCTTGCGCTCATTGATTTGTTTCTTAACGAATATTGGATTGAAAAAGGGCTTTCAGAAAATACCGTTCAATC TTATCGTTTGGATTTAACCGCACTTTGTGATTGGTTGGATAAAAACGACTTGTCTTTGGAAACTTTAGATGCTGTTGATT TGCAAGGTTTTCTAGGAGAGCGTTTGGAGAAAGGTTACAAAGCCACGAGCACTGCGCGAATGTTAAGTGCAATGCGTAAA CTTTTCCAATATTTATATCGGGAAAAATATCGAGTGGATGATCCAAGTGCGGTGCTAAGTTCGCCTAAATTACCCAGTCG CTTGCCAAAATATTTAACCGAGCAGCAAGTGTCAGATTTGCTCAATACGCCAAATGTTGAAGTGCCTTTGGAGTTGCGTG ATAAAGCAATGTTAGAGTTGCTTTATGCAACGGGGCTTCGTGTAACGGAGTTAGTTTCGCTTACGATTGAAAACATGAGC GTGCAACAAGGCGTGGTGCGAGTGATTGGTAAAGGGAACAAGGAACGTATTGTGCCAATGGGGGAAGAAGCTGCCTATTG GGTTCGTCAATTTATGCTTTATGGTCGCCCTGTGCTATTAAATGGGCAGAGTTCTGATGTTGTGTTTCCAAGTCAGCGCG CACAGCAAATGACTCGTCAAACTTTCTGGCATCGTGTAAAACATTATGCCATTCTCGCGGATATTGATGCTGATGCACTT TCTCCTCACGTTCTTCGCCATGCTTTTGCCACCCATTTAGTAAATCACGGTGCGGATTTACGCGTGGTGCAAATGTTGTT GGGTCATACAGATTTATCTACAACACAGATTTATACTCACGTGGCAAAAGAAAGATTGAAACGATTGCATGAAAGATTTC ATCCTAGAGGATAA Protein sequence : MKNLALIDLFLNEYWIEKGLSENTVQSYRLDLTALCDWLDKNDLSLETLDAVDLQGFLGERLEKGYKATSTARMLSAMRK LFQYLYREKYRVDDPSAVLSSPKLPSRLPKYLTEQQVSDLLNTPNVEVPLELRDKAMLELLYATGLRVTELVSLTIENMS VQQGVVRVIGKGNKERIVPMGEEAAYWVRQFMLYGRPVLLNGQSSDVVFPSQRAQQMTRQTFWHRVKHYAILADIDADAL SPHVLRHAFATHLVNHGADLRVVQMLLGHTDLSTTQIYTHVAKERLKRLHERFHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 1e-53 | 47 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 1e-53 | 47 |
