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Name : potB (HI1346) Accession : NP_439497.1 Strain : Haemophilus influenzae Rd KW20 Genome accession: NC_000907 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 1422185 - 1423045 bp Length : 861 bp Strand : - Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGAAGATAATCAATAATAAATTCCAGAAAATTACTGTTGCGATTATCTTCAGTTGGCTAATCTTCTTTGTGCTGATTCC AAACTTATTGGTACTTGCCGTAAGTTTTCTGACTCGAGATGGTAGCAACTTTTATGCATTCCCAATTACTATTGAAAACT ATACAAACTTGTTTAATCCGCTTTATGCACAAGTTGTGTGGAATTCATTGTCTATGTCGGGCATCGCCACCATTATTTGC TTACTAATAGGTTATCCATTTGCTTTTATGATGAGTAAAATTCATCCTAAATATCGACCGCTCTTATTGTTCCTTGTGGT TTTACCATTTTGGACAAACTCGTTAATTCGTATTTATGGAATGAAGGTATTTCTTGGCGTGAAAGGCATACTTAACACGA TGTTAATTGATATGGGAATTTTGAGTGCGCCAATTCGTATTTTGAATACCGAAATTGCGGTAATCATTGGCTTAGTTTAT TTACTATTGCCATTTATGATTTTGCCACTCTACTCTGCCATTGAAAAACTAGATAATCGTTTATTAGAAGCAGCACGAGA TTTAGGCGCAAATACATTCCAACGTTTCTTCCGAGTGATTTTACCATTAACTATGCCAGGCATTATCGCGGGTTGTTTAT TGGTATTATTGCCAGCAATGGGAATGTTTTATGTAGCAGACCTACTCGGTGGAGCAAAAGTCTTGCTTGTTGGTAACGTA ATTAAGAGCGAATTCTTAATTTCTCGTAACTGGCCATTTGGTTCTGCAGTCAGTATTGGTTTAACTGTTCTAATGGCATT GTTGATTTTCGTGTACTACCGCGCGAATAAACTATTGAATAGGAAAGTGGAGTTAGAATAA Protein sequence : MKIINNKFQKITVAIIFSWLIFFVLIPNLLVLAVSFLTRDGSNFYAFPITIENYTNLFNPLYAQVVWNSLSMSGIATIIC LLIGYPFAFMMSKIHPKYRPLLLFLVVLPFWTNSLIRIYGMKVFLGVKGILNTMLIDMGILSAPIRILNTEIAVIIGLVY LLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPLTMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNV IKSEFLISRNWPFGSAVSIGLTVLMALLIFVYYRANKLLNRKVELE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 1e-75 | 61 |
