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Name : hsdR (HI1285) Accession : NP_439437.1 Strain : Haemophilus influenzae Rd KW20 Genome accession: NC_000907 Putative virulence/resistance : Unknown Product : type I restriction enzyme Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1363195 - 1366362 bp Length : 3168 bp Strand : - Note : similar to PID:1685100 DNA sequence : ATGCTCAACGAAAATGACATCGAACAACTTACCCTTCAACGCCTGCAATCCCTCGGTTGGGAATATCGCTACGGTAAAGA CTTGCCTGTTCATGAGGGCAAGTTTGCCCGTGGCGATTTGAGCGGCGTAGTCTTTGTTGAGCAACTGCGTGAGGCGGTGC GTAAACTTAATCCTCAGCTTCCTGAAAGTGCGGTGGATTCTGTAGTGAAATCGGCAACGAAAAGCGATATTGGCGACTTG GTTGTGCGTAATCAGACGTTTTATAAACTGCTGCGTGATGGCGTGCGGGTCGAATATACGCAAAACGGCGAACAGAAAAT TGAGATGGTGCGTTTGGTGGATTTCGAGCATTGGGGAAACAACCGCTTTGTTGCCGTCAATCAATTGGAAATCCGCAGCC GCAAAGGAGGTAAACGGATTCCCGATATTATCGGCTTTGTAAATGGTCTGCCGTTGGTGGTATTTGAGCTCAAAAATCCG TTGCGTGAATCGGCGGATTTGTTGCAGGCGTTTAATCAATTTGAAACCTATAAAGATGAAATTGCCGAGCTGTTTGTTTA CAACCAAGCTCTGATTATTTCAGACGGCATTGTCGCCCGTTTGGGTTCGCTTTCGGCAGATTTCCAACGCTTTACGCCGT GGAAAGTGGTCGATGAAAAAAATAAAAGCGCGCGCTTATATTTTGACGATGAGTTGCAAAGCCTGCTCAATGGCTTAATG CAGCCTGAGGATTTATTGGACTATATCCGCTATTTCGTCTTGTTTGAACGGGATTCCGTTGGCAAAACCATTAAAAAAAT CGCGGCGTACCATCAATATTACGGCGTAAATGAAGCGGTAGATTCCACCATTTGGGCGACTTCAGAAAAAGGCGACCGCC GCATTGGGGTGATGTGGCATACGCAGGGTTCGGGCAAGTCGATTTCGATGCTGTTTTATGCAGGCAAACTGCTTGCACAG CCTGAATTGAAAAATCCTACCATTGTAGTGGTTACCGACCGCAACGATTTAGACGGTCAGCTTTTCCAAACTTTTTCTTC AGGCAAGGATTTAATCAAACAAACACCGCAGCAAGTAGAAGACCGCGATCAACTGCGCCAACTGCTCGCACAAAATGAAG TCGGCGGCGTGTTTTTTACTACGATTCAGAAATTCGCCCTAAATGAGGAAGAAAGCCGCTTCCCTATTTTAAATGAGCGC AACAATATTATTGTGATCAGCGATGAGGCTCACCGCAGCCAATATGGCTTTACGCAAAAGCTGCATAACGGCAAGTTTCA GACAGGTTATGCTCGCCATTTGCGTGATGCTTTACCTAATGCCTCGTTTATTGGTTTTACAGGTACGCCAATTAGCCTTG AAGATAAGGACACGCAAGATGTGTTCGGTCGTTATGTGTCCATTTATGACTTGCAAGATGCGGTGGAAGATGGAGCGACT GTACCGATTGTTTATGATGATGCTCGCCAAATTCGCTTAAATAAAAAAGACCACGATGCTTTGTTTGCAGAAATTGATGC TCTACTAGAAGAGGAGCCATCAACTTCCCTGCGTTTGCGGGAAAAATTACTAGGCTCACAAGAGCGTCTTATCGAATTGG CCGCAGATTTTGTGCAACATTTTGCCAAACGCAATGAAGTGGTGGACAGCAAAGCGATGATGGTGGTTTCCAGCCGTCAA ATTTGCGTGGATTTGTATAATCAGATCATCGCTCTGCACCCTGAATGGCATTCGGACAATATTAACGAAGGGGCGATTAA AATTGTGATGACAGGTTCGGCAAGCGATACGCCTGAAATGCAAAAGCATATTTACAGTAAGCAGGAAAAGCAAACGTTAG AACGTCGCTTTAAAGACCCGAACGATCCGCTGAAAGTGGTGATTGTGCGTGATATGTGGCTGACAGGCTTTGATGCACCG TGCTGTAACACTATGTATCTTGATAAGCCAATGAAAGGGCATAACCTAATGCAAGCCATCGCACGAGTAAACCGTGTATT CGCTAACAAAAGTCGTGAAAACGGTGGGCTTATCGTAGATTATGTTGGTTTGGCAAAAGAATTACGAGCAGCCACACAGC AATACACCAACTCTACAGGCAAAGGTCAATTAGCGGAAGATGTGCAAAGCGTGTTCTTTAAAATGAAAGAACAGCTTGAA TTTATCCGAACTTTGTTTGCGACACCAATTGAAGGAAAAACTTTTGATGTTCAGGCTGCCTTAGAAAAAGATAATCCGAA TGATCTTTTGATGGCGATTCGTTTTGCCGCCAACCATATTTTAAGCCTTGATCAATTATCGTTTGATGGCAAAGCGCACG AGCAGCATTGGTTTAATAAAAAAGAAACCGAGCCACGCAAAAAAGCCTTTTTGAAAACGGCAGGCTTGGTAAAAAAAGGC TATATGCTGTGCGGCACATTGGCTGAAGTTGAGCCGTATAACCAAGAAATCGCCTTTTATGATGCCGTACGGGCAATTTT AACTAAACGTGAACAAAAAGGCACAGGCACAAATGAAAGACAGATTTTATTGAAAAAATTGGTCAATCAAACTGTGTATT CTGAAGGCGTGATTGATTTATTCGATCTGCTAGAAAAACCACAACCACAAATCAGTTTGCTTTCCGAGGAATTTTTACAA ACTGTAAAAAATAGCCCAACTAAAAATTTATGGGTTAGCGCGATGGAGCGTTATTTGGCAAGTGAAATTAAAGTTAAATC AGGCACAAACTTAACCTTGCAAAAAGATTTTGAACGGCGTTTGAAGGAAGCATTGAATCAATACCACAATCACAATTTGA CTGTGGTAGAGATTTTGGACGAACTCTTTAAAATGAGCCAAGATTTCCAAGAACGTTTAGCATTAGGGAAAAAACTAGGA TTAACCAAGGAAGAACTAGCCTTCTATGAAGCTCTATCTCAAAATCAAAGTGCAAAAGATTTGATGGGTGATGAAGTGCT TTCTAAACTGGCGAAAGAAATCACGGAAACACTTAGAAAATCGGTCACAATCGACTGGCAGTACAAAGAAGCGGTGCGGG CAAGAATTAGATTACTCGTTCGACGTGCCTTACAAAAATATAAATACCCGCCTGATAAACAGGAAGAAGCGGTAACTTAT GTGATTAAACAAGCTGAAGAAATTGCTGAGGATTTAACTGGTTTATAA Protein sequence : MLNENDIEQLTLQRLQSLGWEYRYGKDLPVHEGKFARGDLSGVVFVEQLREAVRKLNPQLPESAVDSVVKSATKSDIGDL VVRNQTFYKLLRDGVRVEYTQNGEQKIEMVRLVDFEHWGNNRFVAVNQLEIRSRKGGKRIPDIIGFVNGLPLVVFELKNP LRESADLLQAFNQFETYKDEIAELFVYNQALIISDGIVARLGSLSADFQRFTPWKVVDEKNKSARLYFDDELQSLLNGLM QPEDLLDYIRYFVLFERDSVGKTIKKIAAYHQYYGVNEAVDSTIWATSEKGDRRIGVMWHTQGSGKSISMLFYAGKLLAQ PELKNPTIVVVTDRNDLDGQLFQTFSSGKDLIKQTPQQVEDRDQLRQLLAQNEVGGVFFTTIQKFALNEEESRFPILNER NNIIVISDEAHRSQYGFTQKLHNGKFQTGYARHLRDALPNASFIGFTGTPISLEDKDTQDVFGRYVSIYDLQDAVEDGAT VPIVYDDARQIRLNKKDHDALFAEIDALLEEEPSTSLRLREKLLGSQERLIELAADFVQHFAKRNEVVDSKAMMVVSSRQ ICVDLYNQIIALHPEWHSDNINEGAIKIVMTGSASDTPEMQKHIYSKQEKQTLERRFKDPNDPLKVVIVRDMWLTGFDAP CCNTMYLDKPMKGHNLMQAIARVNRVFANKSRENGGLIVDYVGLAKELRAATQQYTNSTGKGQLAEDVQSVFFKMKEQLE FIRTLFATPIEGKTFDVQAALEKDNPNDLLMAIRFAANHILSLDQLSFDGKAHEQHWFNKKETEPRKKAFLKTAGLVKKG YMLCGTLAEVEPYNQEIAFYDAVRAILTKREQKGTGTNERQILLKKLVNQTVYSEGVIDLFDLLEKPQPQISLLSEEFLQ TVKNSPTKNLWVSAMERYLASEIKVKSGTNLTLQKDFERRLKEALNQYHNHNLTVVEILDELFKMSQDFQERLALGKKLG LTKEELAFYEALSQNQSAKDLMGDEVLSKLAKEITETLRKSVTIDWQYKEAVRARIRLLVRRALQKYKYPPDKQEEAVTY VIKQAEEIAEDLTGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 49 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 42 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 42 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
