Gene Information

Name : PAB0625 (PAB0625)
Accession : NP_126614.1
Strain : Pyrococcus abyssi GE5
Genome accession: NC_000868
Putative virulence/resistance : Resistance
Product : transcriptional repressor smtb - like
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 895182 - 895538 bp
Length : 357 bp
Strand : +
Note : -

DNA sequence : 
ATGGTTGAAGTTTGCAAGGTATATGAAGAACATCTTGACAAGATTATTGAGGCAAAGTCGAGACTTCCTGAAGATGAGAA
AATACTTGAAGTTTCTGATTTCTTTGATGCCTTAGGGAATCCAACGAGACTTAAAATCTTATTCGCCCTCATGGAAGCCG
GTGAACTCTGCACCTGCGATTTATCAGCAATAACCAAATTGTCAGTTTCTGCAATTTCCCATCAGCTTCGCATTCTTAAG
GATAGAAAGATAGTTACCTATCGTAAGGATGGCAAGAACGTCTTCTATCGTCTAGATGACGAGCACATTAGAGAAATCTT
AAGAACAGCGCTCAATCACCTCTCGGAGGTTAGATGA

Protein sequence : 
MVEVCKVYEEHLDKIIEAKSRLPEDEKILEVSDFFDALGNPTRLKILFALMEAGELCTCDLSAITKLSVSAISHQLRILK
DRKIVTYRKDGKNVFYRLDDEHIREILRTALNHLSEVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 9e-19 42
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 9e-19 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAB0625 NP_126614.1 transcriptional repressor smtb - like BAC0366 Protein 1e-13 45
PAB0625 NP_126614.1 transcriptional repressor smtb - like BAC0456 Protein 1e-20 41