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Name : TM1379 (TM1379) Accession : NP_229180.1 Strain : Thermotoga maritima MSB8 Genome accession: NC_000853 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1396221 - 1397498 bp Length : 1278 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATAGATATAAAGCTCATCAGACAAAATCCCGATTTCGTGAAGGAAGCCCTCAGAAAGCGAGGAGAGGATCCCGCTAT AATCGATGAGATTTTGAAGATCGACGCCGACTGGCGCGCTACCATCACGAAAACCAACGAGCTGAGATCCAGAAGAAACG AAATTTCCAAAAATGTGGCAAGGTTGAAAAAAGAAGGGAAAAACGCAGAGGCAGAGGCACTCATCGAGGAAGGGAAAAGA TTAGGAGAAGAGATAAAAGCGTTAGAAGAAAAAGAAAAAGAACTTCAGAAGAAGTTAAACGATCTTCTTTTGATGATTCC GAACATCCCGCATGAGAGTGTCCCCGTTGGAGAAGACGAATCTCAGAACGTTGAAGTGAGAAGGTGGGGAGAGCCGAGAG AATTCGACTTCACCCCGCTCGCTCACTGGGACCTCGGACCTGCGTGGGGGCTCATGGATTTCAGCAGGGCGTCCAAGCTC AGCGGTTCCAGATTCACCGTTATGTATGGAAAACTCGCAAGACTCGAGAGGGCTCTGATAAACTTCATGCTTGACGTTCA TACAAAGGAACACGGTTACACGGAAGTGTGGGTTCCACACCTGGTGAAAAGAGAAACCATCACCATAACCGGACAGCTCC CCAAATTCGAAGAAGAGCTTTATCTTGCTGAGAGGGATGACCTGTTCCTCATTCCGACGGCTGAGGTTCCCCTCGCAGCG CTTCACAGTGGAGAGATCCTCGAAGAGAAAGAACTACCAAAGAAATACGTCTCTTACACTCCCTGTTACCGCAGAGAAGC GGGAAGTTACGGGAAAGACGTGAGGGGGATGATCAGGCAGCATCAATTCGACAAGGTCGAGCTCGTCTGGGTGACCACAC CGGAAAGATCCTTCGAAGATCTTGAAGAGCTTGTGAAAGACGCCGAAACCATTCTTAGAAAATTGGAGCTCCCTTACAGA GTCGTTTCGCTCTGTACGGGAGATCTCGGATTCACCTCCGCGAAAACCTACGATATAGAAGTGTGGCTTCCTTCCTACAA CGCATACAAAGAGATATCTTCCTGCAGTAACGTGACGGACTTTCAGGCGAGAAGAGGAAACATGAGATACAGAAGGAGAT CGGATGGAAAGCTCGAATACGTTCACACGTTGAACGGATCGGGTATCGCCGTTGGAAGGGCACTCGTTGCGATACTGGAA AACTACCAGCAACCAGACGGCAGTGTGAGAGTGCCGGAGGTGCTCGTTCCCTACACAGGGTTCGAGGTGATACCGTAG Protein sequence : MIDIKLIRQNPDFVKEALRKRGEDPAIIDEILKIDADWRATITKTNELRSRRNEISKNVARLKKEGKNAEAEALIEEGKR LGEEIKALEEKEKELQKKLNDLLLMIPNIPHESVPVGEDESQNVEVRRWGEPREFDFTPLAHWDLGPAWGLMDFSRASKL SGSRFTVMYGKLARLERALINFMLDVHTKEHGYTEVWVPHLVKRETITITGQLPKFEEELYLAERDDLFLIPTAEVPLAA LHSGEILEEKELPKKYVSYTPCYRREAGSYGKDVRGMIRQHQFDKVELVWVTTPERSFEDLEELVKDAETILRKLELPYR VVSLCTGDLGFTSAKTYDIEVWLPSYNAYKEISSCSNVTDFQARRGNMRYRRRSDGKLEYVHTLNGSGIAVGRALVAILE NYQQPDGSVRVPEVLVPYTGFEVIP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-96 | 53 |
