PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Pseudomonas putida H8234 (NC_021491)
Location : 2541947 - 2580424 bp
Size : 38478 bp
GC content : 61.0 %
GC bias (=GCregion - GCgenome) : -0.56 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_008094143.1 2541947-2543659 1713 - integrating conjugative element relaxase-
2NA YP_008094144.1 2543882-2544076 195 + hypothetical protein-
3NA YP_008094145.1 2544201-2544566 366 + transcriptional regulator-
4NA YP_008094146.1 2544650-2545588 939 - antirestriction protein-
5NA YP_008094147.1 2545675-2545989 315 - hypothetical protein-
6NA YP_008094148.1 2546298-2546663 366 - hypothetical protein-
7NA YP_008094149.1 2547128-2547484 357 + hypothetical protein-
8NA YP_008094150.1 2547489-2549027 1539 - membrane protein-
9NA YP_008094151.1 2549037-2549327 291 - hypothetical protein-
10NA YP_008094152.1 2549339-2550694 1356 - integrating conjugative element protein-
11NA YP_008094153.1 2550694-2551668 975 - integrating conjugative element protein-
12NA YP_008094154.1 2551667-2551795 129 + hypothetical protein-
13NA YP_008094155.1 2551889-2554630 2742 - conjugal transfer protein-
14NA YP_008094156.1 2554630-2555049 420 - conjugal transfer protein-
15NA YP_008094157.1 2555012-2556520 1509 - integrating conjugative element protein-
16NA YP_008094158.1 2556510-2557316 807 - integrating conjugative element protein-
17NA YP_008094159.1 2557313-2557954 642 - integrating conjugative element protein-
18NA YP_008094160.1 2557951-2558352 402 - hypothetical protein-
19NA YP_008094161.1 2558360-2558617 258 - hypothetical protein-
20NA YP_008094162.1 2558753-2558986 234 - conjugative transfer protein-
21NA YP_008094163.1 2558979-2559314 336 - hypothetical protein-
22NA YP_008094164.1 2559672-2560181 510 + hypothetical protein-
23NA YP_008094165.1 2560252-2561088 837 - hypothetical protein-
24NA YP_008094166.1 2561157-2562278 1122 - hypothetical protein-
25NA YP_008094167.1 2562508-2563176 669 - membrane protein-
26NA YP_008094168.1 2563275-2565398 2124 - conjugal transfer protein TraG-
27NA YP_008094169.1 2565408-2565671 264 - hypothetical protein-
28NA YP_008094170.1 2565824-2566378 555 - lytic transglycosylase-
29NA YP_008094171.1 2566360-2567079 720 - integrating conjugative element protein-
30NA YP_008094172.1 2567090-2567761 672 - hypothetical protein-
31NA YP_008094173.1 2567758-2568171 414 - type IV B pilus protein-
32NA - 2568398-2569104 707 - --
33NA YP_008094174.1 2569170-2569664 495 - DNA repair protein RadCVirulence
34NA YP_008094175.1 2569731-2569988 258 - hypothetical protein-
35NA YP_008094176.1 2570056-2570589 534 - hypothetical protein-
36NA YP_008094177.1 2571331-2573298 1968 - DNA topoisomerase III-
37NA YP_008094178.1 2573396-2573698 303 - XRE family transcriptional regulator-
38NA YP_008094179.1 2573846-2574109 264 + hypothetical protein-
39NA YP_008094180.1 2574203-2574631 429 - single-stranded DNA-binding protein-
40NA YP_008094181.1 2574637-2575131 495 - hypothetical protein-
41NA YP_008094182.1 2575128-2575883 756 - integrating conjugative element protein-
42NA YP_008094183.1 2576035-2577252 1218 - hypothetical protein-
43NA YP_008094184.1 2577246-2577797 552 - hypothetical protein-
44NA YP_008094185.1 2577814-2579313 1500 - chromosome partitioning protein ParB-
45NA YP_008094186.1 2579327-2580205 879 - cobyrinic acid a,c-diamide synthase-
46NA YP_008094187.1 2580209-2580424 216 - AlpA family transcriptional regulator-