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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Pseudomonas putida DOT-T1E (NC_018220) Location : 4570512 - 4612379 bp Size : 41868 bp GC content : 61.7 % GC bias (=GCregion - GCgenome) : 0.26 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | NA | YP_006534810.1 | 4570512-4572224 | 1713 | - | relaxase | - |
| 2 | NA | YP_006534811.1 | 4572440-4572643 | 204 | + | hypothetical protein | - |
| 3 | NA | YP_006534812.1 | 4572768-4573133 | 366 | + | transcriptional regulator | - |
| 4 | NA | YP_006534813.1 | 4573220-4574158 | 939 | - | hypothetical protein | - |
| 5 | NA | YP_006534814.1 | 4574244-4574558 | 315 | - | hypothetical protein | - |
| 6 | NA | YP_006534815.1 | 4574864-4575229 | 366 | - | hypothetical protein | - |
| 7 | NA | YP_006534816.1 | 4575938-4576057 | 120 | + | hypothetical protein | - |
| 8 | NA | YP_006534817.1 | 4576062-4577600 | 1539 | - | hypothetical protein | - |
| 9 | NA | YP_006534818.1 | 4577610-4577915 | 306 | - | hypothetical protein | - |
| 10 | NA | YP_006534819.1 | 4577912-4579267 | 1356 | - | hypothetical protein | - |
| 11 | NA | YP_006534820.1 | 4579267-4579668 | 402 | - | hypothetical protein | - |
| 12 | NA | YP_006534821.1 | 4579890-4580297 | 408 | - | hypothetical protein | - |
| 13 | NA | YP_006534822.1 | 4580891-4581601 | 711 | - | hypothetical protein | - |
| 14 | umuD | YP_006534823.1 | 4581722-4582150 | 429 | + | prophage repressor | - |
| 15 | umuC | YP_006534824.1 | 4582140-4583414 | 1275 | + | DNA-directed DNA polymerase | - |
| 16 | NA | YP_006534825.1 | 4583408-4583605 | 198 | + | hypothetical protein | - |
| 17 | NA | YP_006534826.1 | 4583743-4586484 | 2742 | - | Type IV secretory pathway VirB4 components-like protein | - |
| 18 | NA | YP_006534827.1 | 4586484-4586816 | 333 | - | hypothetical protein | - |
| 19 | NA | YP_006534828.1 | 4586866-4588374 | 1509 | - | hypothetical protein | - |
| 20 | NA | YP_006534829.1 | 4588364-4589170 | 807 | - | hypothetical protein | - |
| 21 | NA | YP_006534830.1 | 4589167-4589808 | 642 | - | hypothetical protein | - |
| 22 | NA | YP_006534831.1 | 4589805-4590206 | 402 | - | hypothetical protein | - |
| 23 | NA | YP_006534832.1 | 4590214-4590591 | 378 | - | hypothetical protein | - |
| 24 | NA | YP_006534833.1 | 4590607-4590840 | 234 | - | hypothetical protein | - |
| 25 | NA | YP_006534834.1 | 4590833-4590955 | 123 | - | hypothetical protein | - |
| 26 | NA | YP_006534835.1 | 4591504-4591830 | 327 | + | NUDIX hydrolase | - |
| 27 | NA | YP_006534836.1 | 4592887-4593780 | 894 | - | LysR family transcriptional regulator | - |
| 28 | NA | YP_006534837.1 | 4593885-4594316 | 432 | + | glutathione-dependent formaldehyde-activating, G | - |
| 29 | NA | YP_006534838.1 | 4594408-4595136 | 729 | - | hypothetical protein | - |
| 30 | NA | YP_006534839.1 | 4595171-4597297 | 2127 | - | hypothetical protein | - |
| 31 | NA | YP_006534840.1 | 4597307-4597585 | 279 | - | hypothetical protein | - |
| 32 | NA | YP_006534841.1 | 4597724-4598278 | 555 | - | lytic transglycosylase, catalytic | - |
| 33 | NA | YP_006534842.1 | 4598260-4598922 | 663 | - | hypothetical protein | - |
| 34 | NA | YP_006534843.1 | 4598990-4599661 | 672 | - | hypothetical protein | - |
| 35 | NA | YP_006534844.1 | 4599658-4600140 | 483 | - | hypothetical protein | - |
| 36 | NA | YP_006534845.1 | 4600304-4601020 | 717 | - | hypothetical protein | - |
| 37 | radC | YP_006534846.1 | 4601086-4601580 | 495 | - | DNA repair protein RadC | Virulence |
| 38 | NA | YP_006534847.1 | 4601647-4601904 | 258 | - | hypothetical protein | - |
| 39 | NA | YP_006534848.1 | 4601972-4602505 | 534 | - | hypothetical protein | - |
| 40 | NA | YP_006534849.1 | 4603247-4605211 | 1965 | - | DNA topoisomerase III | - |
| 41 | NA | YP_006534850.1 | 4605309-4605653 | 345 | - | XRE family transcriptional regulator | - |
| 42 | NA | YP_006534851.1 | 4605796-4606023 | 228 | + | hypothetical protein | - |
| 43 | NA | YP_006534852.1 | 4606118-4606546 | 429 | - | single-strand DNA-binding protein | - |
| 44 | NA | YP_006534853.1 | 4606552-4607046 | 495 | - | hypothetical protein | - |
| 45 | NA | YP_006534854.1 | 4607043-4607798 | 756 | - | hypothetical protein | - |
| 46 | NA | YP_006534855.1 | 4607950-4609167 | 1218 | - | hypothetical protein | - |
| 47 | NA | YP_006534856.1 | 4609161-4609712 | 552 | - | hypothetical protein | - |
| 48 | NA | YP_006534857.1 | 4609729-4611267 | 1539 | - | hypothetical protein | - |
| 49 | NA | YP_006534858.1 | 4611282-4612145 | 864 | - | cobyrinic acid a,c-diamide synthase | - |
| 50 | NA | YP_006534859.1 | 4612164-4612379 | 216 | - | phage transcriptional regulator, AlpA | - |