|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Pantoea ananatis PA13 (NC_017554) Location : 4158362 - 4222061 bp Size : 63700 bp GC content : 54.9 % GC bias (=GCregion - GCgenome) : 1.28 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | NA | YP_005994534.1 | 4158362-4159306 | 945 | - | hypothetical protein | - |
| 2 | NA | YP_005994535.1 | 4159400-4160380 | 981 | - | antirestriction protein | - |
| 3 | NA | YP_005994536.1 | 4160455-4161066 | 612 | - | hypothetical protein | - |
| 4 | NA | YP_005994537.1 | 4161138-4161446 | 309 | - | hypothetical protein | - |
| 5 | NA | YP_005994538.1 | 4161954-4162328 | 375 | - | hypothetical protein | - |
| 6 | NA | YP_005994539.1 | 4162417-4162833 | 417 | - | hypothetical protein | - |
| 7 | NA | YP_005994540.1 | 4163610-4164509 | 900 | - | DNA-binding prophage protein | - |
| 8 | NA | YP_005994541.1 | 4165479-4166084 | 606 | - | ATP-dependent Clp protease proteolytic subunit | - |
| 9 | NA | YP_005994542.1 | 4166608-4168131 | 1524 | - | hypothetical protein | - |
| 10 | NA | YP_005994543.1 | 4168133-4168480 | 348 | - | hypothetical protein | - |
| 11 | NA | YP_005994544.1 | 4168482-4169897 | 1416 | - | integrating conjugative element protein | - |
| 12 | NA | YP_005994545.1 | 4169909-4170880 | 972 | - | integrating conjugative element protein TraU | - |
| 13 | NA | YP_005994546.1 | 4170877-4171284 | 408 | - | integrating conjugative element protein | - |
| 14 | NA | YP_005994547.1 | 4171758-4174193 | 2436 | - | DNA mismatch repair protein MutL | - |
| 15 | NA | YP_005994548.1 | 4174559-4177123 | 2565 | + | putative restriction enzyme | - |
| 16 | NA | YP_005994549.1 | 4177436-4177753 | 318 | - | hypothetical protein | - |
| 17 | NA | YP_005994550.1 | 4177740-4178378 | 639 | - | hypothetical protein | - |
| 18 | NA | YP_005994551.1 | 4178381-4179190 | 810 | - | pentapeptide repeat-containing protein | - |
| 19 | NA | YP_005994552.1 | 4179417-4179821 | 405 | - | hypothetical protein | - |
| 20 | NA | YP_005994553.1 | 4179833-4182643 | 2811 | - | conjugative transfer ATPase | - |
| 21 | NA | YP_005994554.1 | 4182644-4183060 | 417 | - | conjugative transfer region lipoprotein | - |
| 22 | NA | YP_005994555.1 | 4183274-4184797 | 1524 | - | integrating conjugative element protein TraB | - |
| 23 | NA | YP_005994556.1 | 4184794-4185681 | 888 | - | PFL_4704 family integrating conjugative element protein | - |
| 24 | NA | YP_005994557.1 | 4185681-4186340 | 660 | - | PFL_4703 family integrating conjugative element protein | - |
| 25 | NA | YP_005994558.1 | 4186337-4186711 | 375 | - | hypothetical protein | - |
| 26 | NA | YP_005994559.1 | 4186721-4187086 | 366 | - | integrating conjugative element membrane protein | - |
| 27 | NA | YP_005994560.1 | 4187099-4187338 | 240 | - | hypothetical protein | - |
| 28 | NA | YP_005994561.1 | 4187335-4187652 | 318 | - | integrative conjugative element protein | - |
| 29 | NA | YP_005994562.1 | 4187826-4188287 | 462 | + | putative phage membrane protein | - |
| 30 | NA | YP_005994563.1 | 4188287-4188604 | 318 | + | putative cytoplasmic protein | - |
| 31 | NA | YP_005994564.1 | 4188803-4189594 | 792 | - | hypothetical protein | - |
| 32 | NA | YP_005994565.1 | 4190035-4190796 | 762 | - | integrating conjugative element membrane protein | - |
| 33 | NA | YP_005994566.1 | 4190783-4192897 | 2115 | - | TraG-family plasmid transfer protein | - |
| 34 | NA | YP_005994567.1 | 4192894-4193688 | 795 | - | hypothetical protein | - |
| 35 | NA | YP_005994568.1 | 4194161-4194793 | 633 | - | restriction endonuclease | - |
| 36 | NA | YP_005994569.1 | 4194793-4195323 | 531 | - | integrating conjugative element protein TraW | - |
| 37 | NA | YP_005994570.1 | 4195320-4195937 | 618 | - | putative soluble lytic transglycosylase | - |
| 38 | NA | YP_005994571.1 | 4195916-4196629 | 714 | - | integrating conjugative element protein TraG | - |
| 39 | NA | YP_005994572.1 | 4196641-4197480 | 840 | - | putative plasmid transfer protein | - |
| 40 | NA | YP_005994573.1 | 4197936-4199369 | 1434 | - | bacterial shufflon protein | Virulence |
| 41 | NA | YP_005994574.1 | 4199375-4200058 | 684 | - | type IV prepilin peptidase | - |
| 42 | NA | YP_005994575.1 | 4200055-4200540 | 486 | - | transglycosylase | Virulence |
| 43 | NA | YP_005994576.1 | 4200545-4201135 | 591 | - | putative conjugative transfer outer membrane protein PilS | Virulence |
| 44 | NA | YP_005994577.1 | 4201145-4202260 | 1116 | - | type IV pilus biogenesis protein PilR | Virulence |
| 45 | NA | YP_005994578.1 | 4202250-4203812 | 1563 | - | type IV secretion system protein PilQ | Virulence |
| 46 | NA | YP_005994579.1 | 4203820-4204323 | 504 | - | type IV pilus biogenesis protein PilP | Virulence |
| 47 | NA | YP_005994580.1 | 4204310-4205593 | 1284 | - | pilin accessory protein PilO | - |
| 48 | NA | YP_005994581.1 | 4205596-4207269 | 1674 | - | type IVB pilus formation outer membrane protein PilN | Virulence |
| 49 | NA | YP_005994582.1 | 4207280-4207723 | 444 | - | type IV pilus operon exported poprotein PilM | Virulence |
| 50 | NA | YP_005994583.1 | 4207725-4209020 | 1296 | - | pilus biogenesis protein PilL | - |
| 51 | NA | YP_005994584.1 | 4209466-4209903 | 438 | - | hypothetical protein | - |
| 52 | NA | YP_005994585.1 | 4210003-4210557 | 555 | - | single-stranded DNA-binding protein | Virulence |
| 53 | NA | YP_005994586.1 | 4210633-4211142 | 510 | - | hypothetical protein | - |
| 54 | NA | YP_005994587.1 | 4211776-4213794 | 2019 | - | DNA topoisomerase III | - |
| 55 | NA | YP_005994588.1 | 4213806-4214531 | 726 | - | hypothetical protein | - |
| 56 | NA | YP_005994589.1 | 4214891-4216135 | 1245 | - | hypothetical protein | - |
| 57 | NA | YP_005994590.1 | 4216214-4216444 | 231 | - | hypothetical protein | - |
| 58 | NA | YP_005994591.1 | 4216444-4217040 | 597 | - | hypothetical protein | - |
| 59 | NA | YP_005994592.1 | 4217125-4217868 | 744 | - | hypothetical protein | - |
| 60 | NA | YP_005994593.1 | 4217858-4218115 | 258 | - | TraR/DksA family transcriptional regulator | - |
| 61 | NA | YP_005994594.1 | 4218108-4219820 | 1713 | - | ParB-like protein | - |
| 62 | NA | YP_005994595.1 | 4219817-4221181 | 1365 | - | putative DNA helicase | - |
| 63 | NA | YP_005994596.1 | 4221174-4222061 | 888 | - | chromosome partitioning protein | - |