Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Salmonella enterica P-stx-12 (NC_016832) Location : 4378907 - 4514132 bp Size : 135226 bp GC content : 49.6 % GC bias (=GCregion - GCgenome) : -2.44 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_005219893.1 | 4378907-4379200 | 294 | + | hypothetical protein | - |
2 | NA | YP_005219894.1 | 4379197-4379688 | 492 | + | Acetyltransferase, gnat | - |
3 | NA | YP_005219895.1 | 4379929-4380444 | 516 | - | Non-specific acid phosphatase | - |
4 | NA | YP_005219896.1 | 4380724-4380858 | 135 | - | hypothetical protein | - |
5 | NA | YP_005219897.1 | 4381610-4382560 | 951 | + | Chromosome partitioning protein | - |
6 | NA | YP_005219898.1 | 4382557-4383921 | 1365 | + | DNA helicase | - |
7 | NA | YP_005219899.1 | 4383914-4385713 | 1800 | + | hypothetical protein | - |
8 | NA | YP_005219900.1 | 4385927-4386187 | 261 | + | hypothetical protein | - |
9 | NA | YP_005219901.1 | 4386174-4386896 | 723 | + | hypothetical protein | - |
10 | NA | YP_005219902.1 | 4387116-4387538 | 423 | + | hypothetical protein | - |
11 | NA | YP_005219903.1 | 4387538-4387786 | 249 | + | hypothetical protein | - |
12 | NA | YP_005219904.1 | 4387783-4389126 | 1344 | + | hypothetical protein | - |
13 | NA | YP_005219905.1 | 4389162-4389311 | 150 | + | hypothetical protein | - |
14 | NA | YP_005219906.1 | 4389715-4390491 | 777 | + | hypothetical protein | - |
15 | NA | YP_005219907.1 | 4390602-4392596 | 1995 | + | DNA topoisomerase | - |
16 | NA | YP_005219908.1 | 4393264-4393713 | 450 | + | hypothetical protein | - |
17 | NA | YP_005219909.1 | 4393794-4394012 | 219 | + | hypothetical protein | - |
18 | NA | YP_005219910.1 | 4394025-4394561 | 537 | + | Single-stranded DNA-binding protein | Virulence |
19 | NA | - | 4394627-4395577 | 951 | + | - | - |
20 | NA | YP_005219911.1 | 4395742-4396986 | 1245 | + | hypothetical protein | Virulence |
21 | NA | YP_005219912.1 | 4397103-4397408 | 306 | + | hypothetical protein | Virulence |
22 | NA | YP_005219913.1 | 4397652-4397810 | 159 | - | PilN lipoprotein | - |
23 | NA | - | 4397879-4399118 | 1240 | + | - | Virulence |
24 | NA | YP_005219914.1 | 4399120-4400406 | 1287 | + | hypothetical protein | Virulence |
25 | NA | YP_005219915.1 | 4400594-4400974 | 381 | + | hypothetical protein | Virulence |
26 | NA | YP_005219916.1 | 4400984-4402699 | 1716 | + | hypothetical protein | Virulence |
27 | NA | YP_005219917.1 | 4402696-4403781 | 1086 | + | hypothetical protein | Virulence |
28 | NA | YP_005219918.1 | 4403781-4404416 | 636 | + | Prepilin | Virulence |
29 | NA | YP_005219919.1 | 4404426-4404902 | 477 | + | hypothetical protein | Virulence |
30 | NA | YP_005219920.1 | 4404899-4405561 | 663 | + | hypothetical protein | Virulence |
31 | NA | YP_005219921.1 | 4405558-4406865 | 1308 | + | PilV2 | Virulence |
32 | NA | YP_005219922.1 | 4407213-4408364 | 1152 | + | hypothetical protein | - |
33 | NA | YP_005219923.1 | 4408461-4408928 | 468 | + | hypothetical protein | Virulence |
34 | NA | YP_005219924.1 | 4409140-4410015 | 876 | + | hypothetical protein | - |
35 | NA | YP_005219925.1 | 4410522-4411436 | 915 | + | hypothetical protein | - |
36 | NA | YP_005219926.1 | 4411455-4412195 | 741 | + | hypothetical protein | - |
37 | NA | YP_005219927.1 | 4412468-4412860 | 393 | + | Transglycosylase SLT domain protein | - |
38 | NA | YP_005219928.1 | 4412896-4413396 | 501 | + | hypothetical protein | - |
39 | NA | YP_005219929.1 | 4413406-4413975 | 570 | + | Restriction endonuclease | - |
40 | NA | YP_005219930.1 | 4413995-4416085 | 2091 | + | VirD4, Type IV secretory pathway, VirD4 component | - |
41 | NA | YP_005219931.1 | 4416075-4416221 | 147 | + | hypothetical protein | - |
42 | NA | YP_005219932.1 | 4416202-4416840 | 639 | + | hypothetical protein | - |
43 | NA | YP_005219933.1 | 4417077-4417331 | 255 | + | Conserved uncharacterized protein | - |
44 | NA | YP_005219934.1 | 4417331-4417570 | 240 | + | hypothetical protein | - |
45 | NA | YP_005219935.1 | 4417600-4417962 | 363 | + | hypothetical protein | - |
46 | NA | YP_005219936.1 | 4418083-4418292 | 210 | - | hypothetical protein | - |
47 | NA | YP_005219937.1 | 4418451-4418996 | 546 | + | hypothetical protein | - |
48 | NA | YP_005219938.1 | 4418996-4419895 | 900 | + | Conserved uncharacterized protein | - |
49 | NA | YP_005219939.1 | 4419885-4421363 | 1479 | + | hypothetical protein | - |
50 | NA | YP_005219940.1 | 4421494-4421799 | 306 | + | Conserved uncharacterized protein | - |
51 | NA | YP_005219941.1 | 4421799-4422215 | 417 | + | Type IV secretory pathway, VirB4 component | - |
52 | NA | - | 4422212-4424634 | 2423 | + | - | - |
53 | NA | YP_005219942.1 | 4424613-4424792 | 180 | + | hypothetical protein | - |
54 | NA | YP_005219943.1 | 4424789-4425175 | 387 | + | hypothetical protein | - |
55 | NA | YP_005219944.1 | 4425330-4425722 | 393 | + | hypothetical protein | - |
56 | NA | YP_005219945.1 | 4425719-4426687 | 969 | + | PFL4710 family integrating conjugative element protein | - |
57 | NA | YP_005219946.1 | 4426735-4428132 | 1398 | + | Conserved uncharacterized protein | - |
58 | NA | YP_005219947.1 | 4428279-4428461 | 183 | + | hypothetical protein | - |
59 | NA | YP_005219948.1 | 4428465-4429970 | 1506 | + | hypothetical protein | - |
60 | NA | YP_005219949.1 | 4430619-4430741 | 123 | - | hypothetical protein | - |
61 | NA | YP_005219950.1 | 4430782-4430964 | 183 | + | hypothetical protein | - |
62 | NA | YP_005219951.1 | 4431266-4432513 | 1248 | + | hypothetical protein | Virulence |
63 | NA | YP_005219952.1 | 4432498-4433139 | 642 | + | hypothetical protein | Virulence |
64 | NA | YP_005219953.1 | 4433350-4433892 | 543 | - | hypothetical protein | - |
65 | NA | YP_005219954.1 | 4435158-4436078 | 921 | + | hypothetical protein | - |
66 | NA | YP_005219955.1 | 4436802-4437104 | 303 | + | hypothetical protein | - |
67 | NA | YP_005219956.1 | 4437200-4437580 | 381 | + | hypothetical protein | - |
68 | NA | YP_005219957.1 | 4437951-4438160 | 210 | + | hypothetical protein | - |
69 | NA | YP_005219958.1 | 4438178-4438630 | 453 | + | hypothetical protein | - |
70 | NA | YP_005219959.1 | 4438627-4438923 | 297 | + | hypothetical protein | - |
71 | NA | YP_005219960.1 | 4439001-4439459 | 459 | + | hypothetical protein | - |
72 | NA | YP_005219961.1 | 4439548-4441497 | 1950 | + | hypothetical protein | - |
73 | NA | YP_005219962.1 | 4441569-4442477 | 909 | + | hypothetical protein | - |
74 | NA | YP_005219963.1 | 4442551-4443450 | 900 | + | hypothetical protein | - |
75 | NA | YP_005219964.1 | 4443525-4443851 | 327 | + | hypothetical protein | - |
76 | NA | YP_005219965.1 | 4443951-4444106 | 156 | - | hypothetical protein | - |
77 | NA | YP_005219966.1 | 4444352-4445626 | 1275 | - | hypothetical protein | - |
78 | NA | YP_005219967.1 | 4446596-4447696 | 1101 | - | Late control protein D protein | - |
79 | NA | YP_005219968.1 | 4447693-4448178 | 486 | - | Phage P2 GpU | - |
80 | NA | YP_005219969.1 | 4448178-4450958 | 2781 | - | Phage tail tape measure protein | - |
81 | NA | YP_005219970.1 | 4450951-4451070 | 120 | - | hypothetical protein | - |
82 | NA | YP_005219971.1 | 4451085-4451387 | 303 | - | Phage tail protein E | - |
83 | NA | YP_005219972.1 | 4451442-4451957 | 516 | - | Major tail tube protein | - |
84 | NA | YP_005219973.1 | 4451967-4453139 | 1173 | - | Major tail sheath protein | - |
85 | NA | YP_005219974.1 | 4453242-4453460 | 219 | - | inversion of adjacent DNA | - |
86 | NA | YP_005219975.1 | 4453905-4454396 | 492 | + | Guanine nucleotide exchange factor sopE | - |
87 | NA | YP_005219976.1 | 4454594-4455001 | 408 | - | Fels-2 prophage Tfa | - |
88 | NA | YP_005219977.1 | 4455008-4456627 | 1620 | - | Fels-2 prophage protein | - |
89 | NA | YP_005219978.1 | 4456624-4457229 | 606 | - | hypothetical protein | - |
90 | NA | YP_005219979.1 | 4457222-4458130 | 909 | - | Baseplate assembly protein J | - |
91 | NA | YP_005219980.1 | 4458117-4458476 | 360 | - | Phage baseplate assembly protein | - |
92 | NA | YP_005219981.1 | 4458473-4459051 | 579 | - | Phage baseplate assembly protein V | - |
93 | NA | YP_005219982.1 | 4459120-4459566 | 447 | - | Phage virion morphogenesis protein | - |
94 | NA | YP_005219983.1 | 4459559-4459990 | 432 | - | Tail completion protein R | - |
95 | NA | YP_005219984.1 | 4459953-4460126 | 174 | - | Fels-2 prophage protein | - |
96 | NA | YP_005219985.1 | 4460086-4460511 | 426 | - | Phage lysis timing protein LysB | - |
97 | NA | YP_005219986.1 | 4460511-4460888 | 378 | - | hypothetical protein | - |
98 | NA | YP_005219987.1 | 4460893-4461363 | 471 | - | Lysozyme | - |
99 | NA | YP_005219988.1 | 4461383-4461598 | 216 | - | Holin | - |
100 | NA | YP_005219989.1 | 4461602-4461805 | 204 | - | Phage tail protein | - |
101 | NA | YP_005219990.1 | 4461805-4462269 | 465 | - | Head completion/stabilization protein | - |
102 | NA | YP_005219991.1 | 4462363-4463013 | 651 | - | terminase, endonuclease subunit | - |
103 | NA | YP_005219992.1 | 4463017-4464081 | 1065 | - | Major capsid protein | - |
104 | NA | YP_005219993.1 | 4464098-4464931 | 834 | - | Capsid scaffold-like protein | - |
105 | NA | YP_005219994.1 | 4465074-4466840 | 1767 | + | Terminase, ATPase subunit | - |
106 | NA | YP_005219995.1 | 4466840-4467883 | 1044 | + | Presumed portal vertex protein | - |
107 | NA | YP_005219996.1 | 4467932-4468627 | 696 | - | hypothetical protein | - |
108 | NA | YP_005219997.1 | 4468647-4469723 | 1077 | - | hypothetical protein | - |
109 | NA | YP_005219998.1 | 4469708-4470772 | 1065 | - | hypothetical protein | - |
110 | NA | YP_005219999.1 | 4471096-4471329 | 234 | - | DinI-like protein in retron EC67 | - |
111 | NA | YP_005220000.1 | 4471341-4471514 | 174 | - | Levan regulatory protein | - |
112 | NA | - | 4471697-4474092 | 2396 | - | - | - |
113 | NA | YP_005220001.1 | 4474083-4474943 | 861 | - | DNA adenine methylase | - |
114 | NA | YP_005220002.1 | 4474940-4475524 | 585 | - | Exonuclease | - |
115 | NA | YP_005220003.1 | 4475521-4475748 | 228 | - | hypothetical protein | - |
116 | NA | YP_005220004.1 | 4475748-4475981 | 234 | - | hypothetical protein | - |
117 | NA | YP_005220005.1 | 4476049-4476390 | 342 | - | hypothetical protein | - |
118 | NA | YP_005220006.1 | 4476354-4476500 | 147 | - | hypothetical protein | - |
119 | NA | YP_005220007.1 | 4476562-4477071 | 510 | - | hypothetical protein | - |
120 | NA | YP_005220008.1 | 4477104-4477346 | 243 | - | Phage regulatory protein | - |
121 | NA | YP_005220009.1 | 4477691-4478095 | 405 | + | Phage regulatory protein cI | - |
122 | NA | YP_005220010.1 | 4478099-4479124 | 1026 | + | Integrase | - |
123 | NA | YP_005220011.1 | 4479231-4479368 | 138 | - | Protein samA' | - |
124 | NA | YP_005220012.1 | 4479852-4479965 | 114 | + | hypothetical protein | - |
125 | NA | YP_005220013.1 | 4480231-4480488 | 258 | + | hypothetical protein | - |
126 | NA | YP_005220014.1 | 4480499-4481389 | 891 | + | DNA methyltransferase | - |
127 | NA | YP_005220015.1 | 4481389-4482135 | 747 | + | hypothetical protein | - |
128 | NA | YP_005220016.1 | 4482437-4484407 | 1971 | - | Vi polysaccharide export protein vexE | Virulence |
129 | NA | YP_005220017.1 | 4484427-4485731 | 1305 | - | Vi polysaccharide export inner-membrane protein vexD | Virulence |
130 | NA | YP_005220018.1 | 4485754-4486449 | 696 | - | Vi polysaccharide export ATP-binding protein vexC | Virulence |
131 | NA | YP_005220019.1 | 4486475-4487269 | 795 | - | Vi polysaccharide export inner-membrane protein vexB | Virulence |
132 | NA | YP_005220020.1 | 4487279-4488346 | 1068 | - | Vi polysaccharide export protein vexA/tviF | Virulence |
133 | NA | YP_005220021.1 | 4488391-4490127 | 1737 | - | Vi polysaccharide biosynthesis protein vipC/tviE | Virulence |
134 | NA | YP_005220022.1 | 4490127-4492613 | 2487 | - | Vi polysaccharide biosynthesis protein tviD | Virulence |
135 | NA | YP_005220023.1 | 4492646-4493692 | 1047 | - | Vi polysaccharide biosynthesis protein vipB/tviC | Virulence |
136 | NA | YP_005220024.1 | 4493695-4494972 | 1278 | - | Vi polysaccharide biosynthesis protein vipA/tviB | Virulence |
137 | NA | YP_005220025.1 | 4495217-4495375 | 159 | - | Vi polysaccharide biosynthesis protein tviA | - |
138 | NA | YP_005220026.1 | 4496297-4496485 | 189 | + | hypothetical protein | - |
139 | NA | YP_005220027.1 | 4496610-4498121 | 1512 | + | DNA helicase | - |
140 | NA | YP_005220028.1 | 4498105-4499694 | 1590 | + | hypothetical protein | - |
141 | NA | YP_005220029.1 | 4499858-4500871 | 1014 | + | Phage integrase | - |
142 | NA | YP_005220030.1 | 4501298-4501591 | 294 | + | hypothetical protein | - |
143 | NA | YP_005220031.1 | 4501588-4502076 | 489 | + | Acetyltransferase, gnat | - |
144 | NA | YP_005220032.1 | 4502256-4502708 | 453 | - | hypothetical protein | - |
145 | NA | YP_005220033.1 | 4503345-4505630 | 2286 | - | hypothetical protein | - |
146 | NA | YP_005220034.1 | 4505711-4507384 | 1674 | - | hypothetical protein | - |
147 | NA | YP_005220035.1 | 4507785-4507910 | 126 | - | hypothetical protein | - |
148 | NA | YP_005220036.1 | 4507931-4508392 | 462 | + | hypothetical protein | - |
149 | NA | YP_005220037.1 | 4508389-4508610 | 222 | + | Transcriptional regulatory protein | - |
150 | NA | YP_005220038.1 | 4508632-4508802 | 171 | + | hypothetical protein | - |
151 | NA | YP_005220039.1 | 4509003-4509233 | 231 | - | hypothetical protein | - |
152 | NA | YP_005220040.1 | 4509467-4510249 | 783 | + | DNA-binding prophage protein | - |
153 | NA | YP_005220041.1 | 4510876-4511100 | 225 | - | Bacteriophage integrase | - |
154 | NA | YP_005220042.1 | 4511230-4512327 | 1098 | - | hypothetical protein | - |
155 | NA | YP_005220043.1 | 4512638-4513897 | 1260 | - | Bacteriophage integrase | - |
156 | tRNA-Phe | - | 4514057-4514132 | 76 | - | tRNA-Phe | - |