|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Pseudomonas fluorescens F113 (NC_016830) Location : 3909702 - 3940377 bp Size : 30676 bp GC content : 57.6 % GC bias (=GCregion - GCgenome) : -3.2 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | virB4 | YP_005208709.1 | 3909702-3912359 | 2658 | - | protein VirB4 | - |
| 2 | NA | YP_005208710.1 | 3912452-3912829 | 378 | - | signal recognition particle gtpase | - |
| 3 | NA | YP_005208711.1 | 3912831-3914348 | 1518 | - | hypothetical protein | - |
| 4 | NA | YP_005208712.1 | 3914338-3915150 | 813 | - | hypothetical protein | - |
| 5 | NA | YP_005208713.1 | 3915147-3915788 | 642 | - | hypothetical protein | - |
| 6 | NA | YP_005208714.1 | 3915785-3916198 | 414 | - | hypothetical protein | - |
| 7 | NA | YP_005208715.1 | 3916206-3916577 | 372 | - | integrating conjugative element membrane protein | - |
| 8 | NA | YP_005208716.1 | 3916595-3916834 | 240 | - | hypothetical protein | - |
| 9 | NA | YP_005208717.1 | 3916831-3917163 | 333 | - | hypothetical protein | - |
| 10 | NA | YP_005208718.1 | 3917555-3918991 | 1437 | + | hypothetical protein | - |
| 11 | NA | YP_005208719.1 | 3919947-3920381 | 435 | - | hypothetical protein | - |
| 12 | NA | YP_005208720.1 | 3920434-3922029 | 1596 | - | transposase orf3 | - |
| 13 | NA | YP_005208721.1 | 3922064-3922360 | 297 | - | ISPpu14, transposase Orf2 | - |
| 14 | NA | YP_005208722.1 | 3922365-3922730 | 366 | - | transposase is3 is911 family protein | - |
| 15 | NA | YP_005208723.1 | 3922805-3923116 | 312 | - | hypothetical protein | - |
| 16 | virD4 | YP_005208724.1 | 3923203-3925308 | 2106 | - | protein VirD4 | - |
| 17 | NA | YP_005208725.1 | 3925318-3925527 | 210 | - | hypothetical protein | - |
| 18 | NA | YP_005208726.1 | 3925830-3926225 | 396 | - | Soluble lytic murein transglycosylase subunit | - |
| 19 | NA | YP_005208727.1 | 3926360-3927079 | 720 | - | hypothetical protein | - |
| 20 | NA | YP_005208728.1 | 3927089-3927760 | 672 | - | methyl-accepting chemotaxis protein | - |
| 21 | NA | YP_005208729.1 | 3927757-3928299 | 543 | - | hypothetical protein | - |
| 22 | NA | YP_005208730.1 | 3928406-3929152 | 747 | - | hypothetical protein | - |
| 23 | radC | YP_005208731.1 | 3929206-3929700 | 495 | - | protein RadC | Virulence |
| 24 | NA | YP_005208732.1 | 3930128-3930709 | 582 | - | hypothetical protein | - |
| 25 | NA | YP_005208733.1 | 3931577-3931834 | 258 | - | XRE family transcriptional regulator | - |
| 26 | NA | YP_005208734.1 | 3932127-3932384 | 258 | + | hypothetical protein | - |
| 27 | topB | YP_005208735.1 | 3932424-3934394 | 1971 | - | protein TopB | - |
| 28 | NA | YP_005208736.1 | 3934618-3935088 | 471 | - | Single-stranded DNA-binding protein in PFGI-1-like cluster | - |
| 29 | NA | YP_005208737.1 | 3935091-3935414 | 324 | - | integrase regulator R | - |
| 30 | NA | YP_005208738.1 | 3935600-3936355 | 756 | - | hypothetical protein | - |
| 31 | NA | YP_005208739.1 | 3936500-3937687 | 1188 | - | hypothetical protein | - |
| 32 | NA | YP_005208740.1 | 3937684-3938232 | 549 | - | hypothetical protein | - |
| 33 | NA | YP_005208741.1 | 3938229-3939800 | 1572 | - | protein with ParB-like nuclease domain in PFGI-1-like cluster | - |
| 34 | NA | YP_005208742.1 | 3940207-3940377 | 171 | - | transcriptional regulator in PFGI-1-like cluster | - |