PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Pseudomonas putida S16 (NC_015733)
Location : 2624808 - 2663967 bp
Size : 39160 bp
GC content : 61.8 %
GC bias (=GCregion - GCgenome) : -0.57 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_004701773.1 2624808-2626535 1728 - relaxase-
2NA YP_004701774.1 2626757-2626951 195 + hypothetical protein-
3NA YP_004701775.1 2627079-2627444 366 + putative transcriptional regulator-
4NA YP_004701776.1 2627531-2628469 939 - hypothetical protein-
5NA YP_004701777.1 2629181-2629585 405 - hypothetical protein-
6NA YP_004701778.1 2630368-2631906 1539 - hypothetical protein-
7NA YP_004701779.1 2631916-2632164 249 - hypothetical protein-
8NA YP_004701780.1 2632218-2633537 1320 - hypothetical protein-
9NA YP_004701781.1 2633573-2634334 762 - hypothetical protein-
10NA YP_004701782.1 2634767-2637508 2742 - type IV secretory pathway VirB4 components-like protein-
11NA YP_004701783.1 2637508-2637927 420 - hypothetical protein-
12NA YP_004701784.1 2637890-2639398 1509 - hypothetical protein-
13NA YP_004701785.1 2639388-2640194 807 - hypothetical protein-
14NA YP_004701786.1 2640194-2640874 681 - hypothetical protein-
15NA YP_004701787.1 2640829-2641128 300 - hypothetical protein-
16NA YP_004701788.1 2641238-2641495 258 - hypothetical protein-
17NA YP_004701789.1 2641631-2641870 240 - hypothetical protein-
18NA YP_004701790.1 2642484-2643386 903 - putative AraC family transcriptional regulator-
19NA YP_004701791.1 2643516-2644259 744 + short-chain dehydrogenase/reductase SDR-
20NA YP_004701792.1 2644277-2644678 402 + glyoxalase-
21NA YP_004701793.1 2644660-2645652 993 + hypothetical protein-
22NA YP_004701794.1 2645713-2646441 729 - hypothetical protein-
23NA YP_004701795.1 2646477-2648603 2127 - hypothetical protein-
24NA YP_004701796.1 2648613-2648987 375 - hypothetical protein-
25NA YP_004701797.1 2649071-2649538 468 - lytic transglycosylase-
26NA YP_004701798.1 2649607-2650323 717 - hypothetical protein-
27NA YP_004701799.1 2650334-2651002 669 - hypothetical protein-
28NA YP_004701800.1 2650999-2651382 384 - type IV B pilus protein-
29NA YP_004701801.1 2651648-2652364 717 - hypothetical protein-
30NA YP_004701802.1 2652424-2652918 495 - DNA repair protein RadCVirulence
31NA YP_004701803.1 2652980-2653237 258 - hypothetical protein-
32NA YP_004701804.1 2653298-2653699 402 - hypothetical protein-
33NA YP_004701805.1 2654552-2656531 1980 - DNA topoisomerase III-
34NA YP_004701806.1 2656643-2656984 342 - XRE family transcriptional regulator-
35NA YP_004701807.1 2657125-2657367 243 + hypothetical protein-
36NA YP_004701808.1 2657412-2657840 429 - single-stranded DNA-binding protein-
37NA YP_004701809.1 2657837-2658340 504 - hypothetical protein-
38NA YP_004701810.1 2658337-2659092 756 - hypothetical protein-
39NA YP_004701811.1 2659418-2660611 1194 - hypothetical protein-
40NA YP_004701812.1 2660605-2661156 552 - hypothetical protein-
41NA YP_004701813.1 2661173-2662639 1467 - hypothetical protein-
42NA YP_004701814.1 2662836-2663723 888 - cobyrinic acid a,c-diamide synthase-
43NA YP_004701815.1 2663728-2663967 240 - phage transcriptional regulator AlpA-