PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Pseudomonas brassicacearum NFM421 (NC_015379)
Location : 2428591 - 2465666 bp
Size : 37076 bp
GC content : 54.7 %
GC bias (=GCregion - GCgenome) : -6.08 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_004353220.1 2428591-2428863 273 - hypothetical protein-
2NA YP_004353221.1 2429114-2430931 1818 - hypothetical protein-
3NA YP_004353222.1 2431509-2433014 1506 - hypothetical protein-
4NA YP_004353223.1 2433011-2433364 354 - hypothetical protein-
5NA YP_004353224.1 2433361-2434770 1410 - hypothetical protein-
6NA YP_004353225.1 2434767-2435720 954 - hypothetical protein-
7NA YP_004353226.1 2436020-2436790 771 + hypothetical protein-
8NA YP_004353227.1 2436972-2437463 492 - DNA repair proteinVirulence
9NA YP_004353228.1 2438000-2438635 636 + hypothetical protein-
10NA YP_004353229.1 2438852-2439376 525 + membrane protein-
11NA YP_004353230.1 2439770-2442607 2838 - hypothetical protein-
12NA YP_004353231.1 2442607-2443032 426 - hypothetical protein-
13NA YP_004353232.1 2443010-2444446 1437 - hypothetical protein-
14NA YP_004353233.1 2444436-2445323 888 - hypothetical protein-
15NA YP_004353234.1 2445320-2446003 684 - hypothetical protein-
16NA YP_004353235.1 2446000-2446395 396 - hypothetical protein-
17NA YP_004353236.1 2446408-2446767 360 - hypothetical protein-
18NA YP_004353237.1 2446788-2447021 234 - hypothetical protein-
19NA YP_004353238.1 2447018-2447356 339 - hypothetical protein-
20NA YP_004353239.1 2447492-2447956 465 - hypothetical protein-
21NA YP_004353240.1 2448034-2448783 750 - hypothetical protein-
22NA YP_004353241.1 2448780-2450909 2130 - hypothetical protein-
23NA YP_004353242.1 2450912-2451340 429 - hypothetical protein-
24NA YP_004353243.1 2451499-2452218 720 - hypothetical protein-
25NA YP_004353244.1 2452200-2452871 672 - hypothetical protein-
26NA YP_004353245.1 2452868-2453395 528 - hypothetical protein-
27NA YP_004353246.1 2453562-2453864 303 - hypothetical protein-
28NA YP_004353247.1 2453994-2454479 486 - hypothetical protein-
29NA YP_004353248.1 2454613-2455020 408 - hypothetical protein-
30NA YP_004353249.1 2455860-2457875 2016 - DNA topoisomerase III-
31NA YP_004353250.1 2458170-2458565 396 - single-strand binding protein-
32NA YP_004353251.1 2458562-2459077 516 - hypothetical protein-
33NA YP_004353252.1 2459077-2459862 786 - hypothetical protein-
34NA YP_004353253.1 2460021-2461166 1146 - hypothetical protein-
35NA YP_004353254.1 2461171-2461731 561 - hypothetical protein-
36NA YP_004353255.1 2461743-2463293 1551 - hypothetical protein-
37NA YP_004353256.1 2463485-2463706 222 - AlpA family transcriptional regulatorVirulence
38NA YP_004353257.1 2463815-2464519 705 - hypothetical protein-
39NA YP_004353258.1 2464776-2465666 891 - LysR family transcriptional regulator-