|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Alicycliphilus denitrificans BC (NC_014910) Location : 4169867 - 4210676 bp Size : 40810 bp GC content : 66.4 % GC bias (=GCregion - GCgenome) : -1.91 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | NA | YP_004128587.1 | 4169867-4170613 | 747 | + | receptor protein-tyrosine kinase | - |
| 2 | NA | YP_004128588.1 | 4170733-4170945 | 213 | + | prophage cp4-57 regulatory | - |
| 3 | NA | YP_004128589.1 | 4170988-4171863 | 876 | + | cobyrinic acid a,c-diamide synthase | - |
| 4 | NA | YP_004128590.1 | 4171847-4172116 | 270 | + | hypothetical protein | - |
| 5 | NA | YP_004128591.1 | 4172109-4173782 | 1674 | + | hypothetical protein | - |
| 6 | NA | YP_004128592.1 | 4173797-4174357 | 561 | + | hypothetical protein | - |
| 7 | NA | YP_004128593.1 | 4174361-4175593 | 1233 | + | hypothetical protein | - |
| 8 | NA | YP_004128594.1 | 4176013-4176807 | 795 | + | hypothetical protein | - |
| 9 | NA | YP_004128595.1 | 4176804-4177331 | 528 | + | hypothetical protein | - |
| 10 | NA | YP_004128596.1 | 4177405-4177857 | 453 | + | single-strand binding protein/primosomal replication protein n | - |
| 11 | NA | YP_004128597.1 | 4178134-4179306 | 1173 | + | DNA topoisomerase | - |
| 12 | NA | YP_004128598.1 | 4179316-4180119 | 804 | - | istb domain-containing protein ATP-binding protein | - |
| 13 | NA | YP_004128599.1 | 4180109-4181635 | 1527 | - | integrase catalytic region protein | - |
| 14 | NA | YP_004128600.1 | 4181744-4182091 | 348 | + | hypothetical protein | - |
| 15 | NA | YP_004128601.1 | 4182156-4183265 | 1110 | + | hypothetical protein | - |
| 16 | NA | YP_004128602.1 | 4183315-4183635 | 321 | + | hypothetical protein | - |
| 17 | NA | YP_004128603.1 | 4183725-4184030 | 306 | + | hypothetical protein | - |
| 18 | NA | YP_004128604.1 | 4184163-4186442 | 2280 | + | dead-like helicase | - |
| 19 | NA | YP_004128605.1 | 4186580-4187179 | 600 | + | integrating conjugative element protein pill, pfgi-1 | - |
| 20 | NA | YP_004128606.1 | 4187176-4187820 | 645 | + | hypothetical protein | - |
| 21 | NA | YP_004128607.1 | 4187835-4188560 | 726 | + | hypothetical protein | - |
| 22 | NA | YP_004128608.1 | 4188542-4189144 | 603 | + | lytic transglycosylase | - |
| 23 | NA | YP_004128609.1 | 4189141-4189689 | 549 | + | hypothetical protein | - |
| 24 | NA | YP_004128610.1 | 4189694-4191886 | 2193 | + | hypothetical protein | - |
| 25 | NA | YP_004128611.1 | 4191883-4192644 | 762 | + | integrating conjugative element protein, pfl4697, membrane | - |
| 26 | NA | YP_004128612.1 | 4192743-4193126 | 384 | + | hypothetical protein | - |
| 27 | NA | YP_004128613.1 | 4193123-4193356 | 234 | + | hypothetical protein | - |
| 28 | NA | YP_004128614.1 | 4193373-4193732 | 360 | + | hypothetical protein | - |
| 29 | NA | YP_004128615.1 | 4193744-4194154 | 411 | + | hypothetical protein | - |
| 30 | NA | YP_004128616.1 | 4194151-4194843 | 693 | + | hypothetical protein | - |
| 31 | NA | YP_004128617.1 | 4194840-4195754 | 915 | + | secreted protein | - |
| 32 | NA | YP_004128618.1 | 4195744-4197162 | 1419 | + | integrating conjugative element protein, pfl4705 | - |
| 33 | NA | YP_004128619.1 | 4197143-4197592 | 450 | + | conjugative transfer region lipoprotein | - |
| 34 | NA | YP_004128620.1 | 4197592-4200474 | 2883 | + | hypothetical protein | - |
| 35 | NA | YP_004128621.1 | 4200499-4201263 | 765 | + | dsba oxidoreductase | - |
| 36 | NA | YP_004128622.1 | 4201440-4201934 | 495 | + | DNA repair protein radc | Virulence |
| 37 | NA | YP_004128623.1 | 4202098-4202544 | 447 | + | hypothetical protein | - |
| 38 | NA | YP_004128624.1 | 4202541-4203488 | 948 | + | hypothetical protein | - |
| 39 | NA | YP_004128625.1 | 4203499-4204893 | 1395 | + | integrating conjugative element protein, pfl4711 | - |
| 40 | NA | YP_004128626.1 | 4204890-4205237 | 348 | + | hypothetical protein | - |
| 41 | NA | YP_004128627.1 | 4205253-4206776 | 1524 | + | hypothetical protein | - |
| 42 | NA | YP_004128628.1 | 4206783-4207142 | 360 | - | hypothetical protein | - |
| 43 | NA | YP_004128629.1 | 4207227-4207859 | 633 | - | res domain-containing protein | - |
| 44 | NA | YP_004128630.1 | 4207872-4208498 | 627 | - | hypothetical protein | - |
| 45 | NA | YP_004128631.1 | 4208814-4210676 | 1863 | + | relaxase | - |