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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli ED1a (NC_011745) Location : 3480094 - 3562378 bp Size : 82285 bp GC content : 51.6 % GC bias (=GCregion - GCgenome) : 0.84 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | NA | YP_002399413.1 | 3480094-3481614 | 1521 | - | hypothetical protein | - |
| 2 | NA | YP_002399414.1 | 3481618-3482010 | 393 | - | hypothetical protein | - |
| 3 | NA | YP_002399415.1 | 3481976-3483457 | 1482 | - | hypothetical protein | - |
| 4 | NA | YP_002399416.1 | 3483409-3484383 | 975 | - | hypothetical protein | - |
| 5 | NA | YP_002399417.1 | 3484380-3484778 | 399 | - | hypothetical protein | - |
| 6 | NA | YP_002399418.1 | 3484642-3484920 | 279 | - | hypothetical protein | - |
| 7 | NA | YP_002399419.1 | 3485005-3487095 | 2091 | - | bifunctional enterobactin receptor/adhesin protein | Virulence |
| 8 | NA | YP_002399420.1 | 3487487-3487873 | 387 | - | hypothetical protein | - |
| 9 | NA | YP_002399421.1 | 3487870-3490686 | 2817 | - | putative plasmid-related outer membrane ATPase | - |
| 10 | NA | YP_002399422.1 | 3490686-3491099 | 414 | - | putative lipoprotein | - |
| 11 | NA | YP_002399423.1 | 3491117-3492595 | 1479 | - | hypothetical protein | - |
| 12 | NA | YP_002399424.1 | 3492585-3493493 | 909 | - | hypothetical protein | - |
| 13 | NA | YP_002399425.1 | 3493490-3494137 | 648 | - | hypothetical protein | - |
| 14 | NA | YP_002399426.1 | 3494134-3494511 | 378 | - | hypothetical protein | - |
| 15 | NA | YP_002399427.1 | 3494518-3494895 | 378 | - | hypothetical protein | - |
| 16 | NA | YP_002399428.1 | 3494926-3495168 | 243 | - | hypothetical protein | - |
| 17 | NA | YP_002399429.1 | 3495168-3495530 | 363 | - | hypothetical protein | - |
| 18 | NA | YP_002399430.1 | 3495622-3496188 | 567 | + | hypothetical protein | - |
| 19 | NA | YP_002399431.1 | 3496223-3496387 | 165 | - | hypothetical protein | - |
| 20 | NA | YP_002399432.1 | 3496643-3497410 | 768 | - | hypothetical protein | - |
| 21 | NA | YP_002399433.1 | 3497385-3499502 | 2118 | - | putative plasmid transfer protein | - |
| 22 | NA | YP_002399434.1 | 3499495-3500325 | 831 | - | hypothetical protein | - |
| 23 | NA | YP_002399435.1 | 3500297-3500899 | 603 | - | putative restriction endonuclease | - |
| 24 | NA | YP_002399436.1 | 3500896-3501426 | 531 | - | hypothetical protein | - |
| 25 | NA | YP_002399437.1 | 3501423-3502085 | 663 | - | putative Lytic transglycosylase, catalytic | - |
| 26 | NA | YP_002399438.1 | 3502064-3502786 | 723 | - | hypothetical protein | - |
| 27 | NA | YP_002399439.1 | 3502791-3503558 | 768 | - | hypothetical protein | - |
| 28 | pilL | - | 3503555-3504136 | 582 | - | - | - |
| 29 | NA | YP_002399440.1 | 3504291-3504500 | 210 | - | hypothetical protein | - |
| 30 | NA | - | 3504494-3504910 | 417 | - | - | - |
| 31 | NA | YP_002399441.1 | 3505063-3506586 | 1524 | - | putative reverse transcriptase protein from putative prophage or plasmid | Virulence |
| 32 | insO | - | 3507178-3507603 | 426 | - | - | - |
| 33 | NA | - | 3507630-3507968 | 339 | - | - | - |
| 34 | NA | YP_002399442.1 | 3508002-3508181 | 180 | - | hypothetical protein | - |
| 35 | NA | YP_002399443.1 | 3508255-3509214 | 960 | - | hypothetical protein | - |
| 36 | ssb | YP_002399444.1 | 3509261-3509818 | 558 | - | Single-stranded DNA-binding protein | - |
| 37 | NA | YP_002399445.1 | 3509831-3510052 | 222 | - | hypothetical protein | - |
| 38 | NA | YP_002399446.1 | 3510146-3510559 | 414 | - | hypothetical protein | - |
| 39 | NA | YP_002399447.1 | 3510670-3510825 | 156 | + | hypothetical protein | - |
| 40 | kpsF | YP_002399448.1 | 3511600-3512619 | 1020 | + | Polysialic acid capsule expression protein | Virulence |
| 41 | kpsE | YP_002399449.1 | 3512691-3513839 | 1149 | + | Capsule polysaccharide export inner-membrane protein | Virulence |
| 42 | kpsD | YP_002399450.1 | 3513860-3515539 | 1680 | + | Polysialic acid transport protein | Virulence |
| 43 | kpsU | YP_002399451.1 | 3515549-3516289 | 741 | + | 3-deoxy-manno-octulosonate cytidylyltransferase | Virulence |
| 44 | kpsC | YP_002399452.1 | 3516286-3518313 | 2028 | + | Capsule polysaccharide export protein | Virulence |
| 45 | kpsS | YP_002399453.1 | 3518348-3519586 | 1239 | + | Capsule polysaccharide export protein | Virulence |
| 46 | NA | YP_002399454.1 | 3519707-3520348 | 642 | - | hypothetical protein | - |
| 47 | NA | YP_002399455.1 | 3520436-3523888 | 3453 | - | putative hydrolase | - |
| 48 | kpsT | YP_002399456.1 | 3524137-3524805 | 669 | - | Polysialic acid transport ATP-binding protein kpsT | Virulence |
| 49 | kpsM | YP_002399457.1 | 3524802-3525638 | 837 | - | Polysialic acid transport protein | Virulence |
| 50 | yghD | YP_002399458.1 | 3526751-3527287 | 537 | - | putative general secretion pathway protein YghD | Virulence |
| 51 | yghE | YP_002399459.1 | 3527289-3528467 | 1179 | - | GspL-like protein | Virulence |
| 52 | NA | YP_002399460.1 | 3528464-3529441 | 978 | - | GspK-like type II secretion protein | Virulence |
| 53 | NA | YP_002399461.1 | 3529438-3530043 | 606 | - | hypothetical protein | Virulence |
| 54 | NA | YP_002399462.1 | 3530040-3530411 | 372 | - | putative GspI-like type II secretion protein | Virulence |
| 55 | NA | YP_002399463.1 | 3530408-3530971 | 564 | - | hypothetical protein | Virulence |
| 56 | NA | YP_002399464.1 | 3530975-3531457 | 483 | - | putative general secretion pathway protein G (epsG-like) | Virulence |
| 57 | epsF | YP_002399465.1 | 3531447-3532670 | 1224 | - | General secretion pathway protein F | Virulence |
| 58 | epsE | YP_002399466.1 | 3532670-3534163 | 1494 | - | general secretion pathway protein E | Virulence |
| 59 | epsD | YP_002399467.1 | 3534163-3536223 | 2061 | - | general secretion pathway protein D | Virulence |
| 60 | yghF | YP_002399468.1 | 3536253-3537212 | 960 | - | putative type II secretion protein GspC | Virulence |
| 61 | yghG | YP_002399469.1 | 3537230-3537640 | 411 | - | hypothetical protein | - |
| 62 | pppA | YP_002399470.1 | 3537706-3538515 | 810 | - | bifunctional prepilin leader peptidase and methylase | - |
| 63 | yghJ | YP_002399471.1 | 3538679-3543259 | 4581 | - | inner membrane lipoprotein | Virulence |
| 64 | yghK | YP_002399472.1 | 3543725-3545407 | 1683 | - | glycolate transporter | - |
| 65 | glcB | YP_002399473.1 | 3545763-3547934 | 2172 | - | malate synthase G | - |
| 66 | glcG | YP_002399474.1 | 3547956-3548360 | 405 | - | hypothetical protein | - |
| 67 | glcF | - | 3548365-3549324 | 960 | - | - | - |
| 68 | glcE | YP_002399475.1 | 3549597-3550649 | 1053 | - | glycolate oxidase FAD binding subunit | - |
| 69 | glcD | YP_002399476.1 | 3550649-3552148 | 1500 | - | glycolate oxidase subunit GlcD | - |
| 70 | glcC | YP_002399477.1 | 3552399-3553163 | 765 | + | DNA-binding transcriptional regulator GlcC | - |
| 71 | yghO | YP_002399478.1 | 3553170-3554312 | 1143 | - | putative DNA-binding transcriptional regulator | - |
| 72 | NA | - | 3554656-3556407 | 1752 | + | - | - |
| 73 | NA | YP_002399479.1 | 3556404-3557318 | 915 | + | putative epimerase | - |
| 74 | NA | YP_002399480.1 | 3557350-3557598 | 249 | + | hypothetical protein | - |
| 75 | NA | YP_002399481.1 | 3557598-3558770 | 1173 | + | putative 8-amino-7-oxononanoate synthase | - |
| 76 | NA | YP_002399482.1 | 3558805-3559965 | 1161 | - | hypothetical protein | - |
| 77 | NA | YP_002399483.1 | 3559881-3560951 | 1071 | - | hypothetical protein | - |
| 78 | NA | YP_002399484.1 | 3560982-3561542 | 561 | - | putative transcriptional regulator | - |
| 79 | NA | YP_002399485.1 | 3561542-3562378 | 837 | - | hypothetical protein | - |