PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Pseudomonas putida W619 (NC_010501)
Location : 3628325 - 3649366 bp
Size : 21042 bp
GC content : 62.8 %
GC bias (=GCregion - GCgenome) : 1.4 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_001750139.1 3628325-3628540 216 + phage transcriptional regulator AlpA-
2NA YP_001750140.1 3628543-3629433 891 + cobyrinic acid ac-diamide synthase-
3NA YP_001750141.1 3629437-3630936 1500 + hypothetical protein-
4NA YP_001750142.1 3630953-3631504 552 + hypothetical protein-
5NA YP_001750143.1 3631498-3632715 1218 + hypothetical protein-
6NA YP_001750144.1 3632867-3633622 756 + hypothetical protein-
7NA YP_001750145.1 3633619-3634113 495 + hypothetical protein-
8NA YP_001750146.1 3634119-3634547 429 + single-stranded DNA-binding protein-
9NA YP_001750147.1 3634642-3634869 228 - hypothetical protein-
10NA YP_001750148.1 3635010-3635354 345 + XRE family transcriptional regulator-
11NA YP_001750149.1 3635452-3637419 1968 + DNA topoisomerase III-
12NA YP_001750150.1 3638161-3638691 531 + hypothetical protein-
13NA YP_001750151.1 3638759-3639016 258 + hypothetical protein-
14NA YP_001750152.1 3639084-3639578 495 + DNA repair protein RadCVirulence
15NA YP_001750153.1 3639644-3640360 717 + hypothetical protein-
16NA YP_001750154.1 3640491-3641006 516 + type IV B pilus protein-
17NA YP_001750155.1 3641003-3641674 672 + hypothetical protein-
18NA YP_001750156.1 3641685-3642404 720 + hypothetical protein-
19NA YP_001750157.1 3642386-3642940 555 + lytic transglycosylase-
20NA YP_001750158.1 3642937-3643356 420 + hypothetical protein-
21NA YP_001750159.1 3643366-3645489 2124 + hypothetical protein-
22NA YP_001750160.1 3645588-3646256 669 + hypothetical protein-
23NA YP_001750161.1 3646633-3647175 543 - cytochrome B561-
24NA YP_001750162.1 3647343-3648707 1365 - integral membrane sensor signal transduction histidine kinase-
25NA YP_001750163.1 3648704-3649366 663 - two component transcriptional regulatorVirulence