PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pestis Pestoides F (NC_009381)
Location : 1364837 - 1401317 bp
Size : 36481 bp
GC content : 56.4 %
GC bias (=GCregion - GCgenome) : 8.72 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Asn - 1364837-1364912 76 + tRNA-Asn-
2NA YP_001162577.1 1365074-1366336 1263 + integrase-
3NA YP_001162578.1 1366530-1367834 1305 - salicylate synthase Irp9Virulence
4NA YP_001162579.1 1367862-1369250 1389 - signal transducerVirulence
5NA YP_001162580.1 1369135-1370937 1803 - inner membrane ABC-transporter YbtQVirulence
6NA YP_001162581.1 1370924-1372636 1713 - lipoprotein inner membrane ABC-transporterVirulence
7NA YP_001162582.1 1372893-1373852 960 + transcriptional regulator YbtAVirulence
8NA YP_001162583.1 1374043-1380150 6108 + yersiniabactin biosynthetic proteinVirulence
9NA YP_001162584.1 1380238-1389729 9492 + yersiniabactin biosynthetic proteinVirulence
10NA YP_001162585.1 1389726-1390826 1101 + yersiniabactin biosynthetic protein YbtUVirulence
11NA YP_001162586.1 1390838-1391626 789 + yersiniabactin biosynthetic protein YbtTVirulence
12NA YP_001162587.1 1391630-1393207 1578 + yersiniabactin siderophore biosynthetic proteinVirulence
13NA YP_001162588.1 1393338-1395359 2022 + pesticin/yersiniabactin receptor proteinVirulence
14NA YP_001162589.1 1396605-1397159 555 + hypothetical protein-
15NA YP_001162590.1 1397299-1397484 186 + transcriptional regulatorVirulence
16NA YP_001162591.1 1397503-1397667 165 + hypothetical protein-
17NA YP_001162592.1 1397673-1398254 582 + hypothetical protein-
18NA YP_001162593.1 1398244-1398453 210 + hypothetical protein-
19NA YP_001162594.1 1398696-1398809 114 + hypothetical protein-
20NA YP_001162595.1 1398853-1399632 780 - transposase/IS protein-
21NA YP_001162596.1 1399632-1400654 1023 - transposase-
22NA YP_001162597.1 1401132-1401317 186 + hypothetical protein-


tRNA-Asn