|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Acidovorax sp. JS42 (NC_008782) Location : 1454512 - 1519833 bp Size : 65322 bp GC content : 65.0 % GC bias (=GCregion - GCgenome) : -1.16 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | NA | YP_985678.1 | 1454512-1456494 | 1983 | - | relaxase | - |
| 2 | NA | YP_985679.1 | 1456658-1457284 | 627 | + | hypothetical protein | - |
| 3 | NA | YP_985680.1 | 1457297-1457914 | 618 | + | hypothetical protein | - |
| 4 | NA | YP_985681.1 | 1458014-1458376 | 363 | + | hypothetical protein | - |
| 5 | NA | YP_985682.1 | 1458383-1459906 | 1524 | - | hypothetical protein | - |
| 6 | NA | YP_985683.1 | 1459921-1460292 | 372 | - | hypothetical protein | - |
| 7 | NA | YP_985684.1 | 1460289-1461686 | 1398 | - | hypothetical protein | - |
| 8 | NA | YP_985685.1 | 1461696-1462643 | 948 | - | hypothetical protein | - |
| 9 | NA | YP_985686.1 | 1462640-1463086 | 447 | - | hypothetical protein | - |
| 10 | NA | YP_985687.1 | 1463250-1463744 | 495 | - | DNA repair protein RadC | Virulence |
| 11 | NA | YP_985688.1 | 1463924-1464709 | 786 | - | hypothetical protein | - |
| 12 | NA | YP_985689.1 | 1464723-1467590 | 2868 | - | hypothetical protein | - |
| 13 | NA | YP_985690.1 | 1467590-1468030 | 441 | - | hypothetical protein | - |
| 14 | NA | YP_985691.1 | 1468011-1469441 | 1431 | - | hypothetical protein | - |
| 15 | NA | YP_985692.1 | 1469431-1470339 | 909 | - | hypothetical protein | - |
| 16 | NA | YP_985693.1 | 1470336-1471028 | 693 | - | hypothetical protein | - |
| 17 | NA | YP_985694.1 | 1471025-1471423 | 399 | - | hypothetical protein | - |
| 18 | NA | YP_985695.1 | 1471435-1471794 | 360 | - | hypothetical protein | - |
| 19 | NA | YP_985696.1 | 1471811-1472044 | 234 | - | hypothetical protein | - |
| 20 | NA | YP_985697.1 | 1472041-1472421 | 381 | - | hypothetical protein | - |
| 21 | NA | YP_985698.1 | 1472520-1473269 | 750 | - | hypothetical protein | - |
| 22 | NA | YP_985699.1 | 1473266-1475458 | 2193 | - | hypothetical protein | - |
| 23 | NA | YP_985700.1 | 1475463-1476011 | 549 | - | hypothetical protein | - |
| 24 | NA | YP_985701.1 | 1476008-1476598 | 591 | - | lytic transglycosylase catalytic subunit | - |
| 25 | NA | YP_985702.1 | 1476580-1477305 | 726 | - | hypothetical protein | - |
| 26 | NA | YP_985703.1 | 1477318-1477944 | 627 | - | hypothetical protein | - |
| 27 | NA | YP_985704.1 | 1477941-1478540 | 600 | - | hypothetical protein | - |
| 28 | NA | YP_985705.1 | 1478729-1479817 | 1089 | - | hypothetical protein | - |
| 29 | NA | YP_985706.1 | 1479834-1481960 | 2127 | - | class I cytochrome c | - |
| 30 | NA | YP_985707.1 | 1482357-1483043 | 687 | - | hypothetical protein | - |
| 31 | NA | YP_985708.1 | 1483155-1485434 | 2280 | - | helicase domain-containing protein | - |
| 32 | NA | YP_985709.1 | 1485571-1485876 | 306 | - | hypothetical protein | - |
| 33 | NA | YP_985710.1 | 1485966-1486286 | 321 | - | hypothetical protein | - |
| 34 | NA | YP_985711.1 | 1486337-1487485 | 1149 | - | hypothetical protein | - |
| 35 | NA | YP_985712.1 | 1487511-1488158 | 648 | - | hypothetical protein | - |
| 36 | NA | - | 1488233-1488418 | 186 | - | - | - |
| 37 | NA | YP_985713.1 | 1488439-1489401 | 963 | + | transposase IS116/IS110/IS902 family protein | - |
| 38 | NA | YP_985714.1 | 1489418-1489678 | 261 | - | hypothetical protein | - |
| 39 | NA | YP_985715.1 | 1489695-1490102 | 408 | - | hypothetical protein | - |
| 40 | NA | YP_985716.1 | 1490209-1490550 | 342 | - | hypothetical protein | - |
| 41 | NA | - | 1490645-1491136 | 492 | - | - | - |
| 42 | NA | - | 1491219-1492634 | 1416 | - | - | - |
| 43 | NA | YP_985717.1 | 1492681-1493922 | 1242 | + | transposase, IS204/IS1001/IS1096/IS1165 family protein | - |
| 44 | NA | YP_985718.1 | 1493881-1494270 | 390 | - | SwissProt accession number P19593-like protein | - |
| 45 | NA | YP_985719.1 | 1494669-1495757 | 1089 | - | transposase, IS4 family protein | - |
| 46 | NA | - | 1495871-1496160 | 290 | + | - | - |
| 47 | NA | YP_985720.1 | 1496191-1496409 | 219 | - | hypothetical protein | - |
| 48 | NA | YP_985721.1 | 1496467-1497384 | 918 | - | hypothetical protein | - |
| 49 | NA | YP_985722.1 | 1497750-1498103 | 354 | - | hypothetical protein | - |
| 50 | NA | YP_985723.1 | 1498183-1498404 | 222 | - | hypothetical protein | - |
| 51 | NA | YP_985724.1 | 1498401-1499213 | 813 | - | hypothetical protein | - |
| 52 | NA | YP_985725.1 | 1499496-1499774 | 279 | - | hypothetical protein | - |
| 53 | NA | YP_985726.1 | 1499872-1500609 | 738 | - | hypothetical protein | - |
| 54 | NA | YP_985727.1 | 1500689-1501375 | 687 | - | hypothetical protein | - |
| 55 | NA | YP_985728.1 | 1501521-1501913 | 393 | - | hypothetical protein | - |
| 56 | NA | - | 1501935-1502331 | 397 | - | - | - |
| 57 | NA | YP_985729.1 | 1502490-1503248 | 759 | - | hypothetical protein | - |
| 58 | NA | YP_985730.1 | 1503291-1504910 | 1620 | - | C-5 cytosine-specific DNA methylase | - |
| 59 | NA | YP_985731.1 | 1505436-1507448 | 2013 | - | DNA topoisomerase III | - |
| 60 | NA | YP_985732.1 | 1507725-1508177 | 453 | - | single-stranded DNA-binding protein | - |
| 61 | NA | YP_985733.1 | 1508251-1508778 | 528 | - | putative integrase regulator R protein | - |
| 62 | NA | YP_985734.1 | 1508775-1509569 | 795 | - | hypothetical protein | - |
| 63 | NA | YP_985735.1 | 1510000-1511235 | 1236 | - | hypothetical protein | - |
| 64 | NA | YP_985736.1 | 1511238-1511798 | 561 | - | hypothetical protein | - |
| 65 | NA | YP_985737.1 | 1511814-1513469 | 1656 | - | hypothetical protein | - |
| 66 | NA | YP_985738.1 | 1513462-1513710 | 249 | - | hypothetical protein | - |
| 67 | NA | YP_985739.1 | 1513694-1514569 | 876 | - | cobyrinic acid a,c-diamide synthase | - |
| 68 | NA | YP_985740.1 | 1514612-1514824 | 213 | - | phage transcriptional regulator AlpA | - |
| 69 | NA | YP_985741.1 | 1514943-1515698 | 756 | - | hypothetical protein | - |
| 70 | NA | YP_985742.1 | 1517148-1517435 | 288 | - | hypothetical protein | - |
| 71 | NA | YP_985743.1 | 1517557-1517823 | 267 | + | transposase IS3/IS911 family protein | - |
| 72 | NA | - | 1517820-1518686 | 867 | + | - | - |
| 73 | NA | YP_985744.1 | 1518853-1519833 | 981 | - | transposase, IS4 family protein | - |