PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Xanthomonas campestris 85-10 (NC_007508)
Location : 2618116 - 2644737 bp
Size : 26622 bp
GC content : 62.3 %
GC bias (=GCregion - GCgenome) : -2.48 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_364015.1 2618116-2618508 393 - hypothetical protein-
2NA YP_364016.1 2618530-2618742 213 - hypothetical protein-
3NA YP_364017.1 2619215-2620753 1539 - cytosine-specific DNA methyltransferase-
4topB YP_364018.1 2621288-2623300 2013 - DNA topoisomerase III-
5NA YP_364019.1 2623580-2624020 441 - single-stranded DNA-binding protein-
6NA YP_364020.1 2624094-2624627 534 - hypothetical protein-
7NA YP_364021.1 2624624-2625379 756 - hypothetical protein-
8NA YP_364022.1 2625701-2626927 1227 - hypothetical protein-
9NA YP_364023.1 2626931-2627491 561 - hypothetical protein-
10NA YP_364024.1 2627507-2629150 1644 - hypothetical protein-
11NA YP_364025.1 2629143-2629403 261 - hypothetical protein-
12NA YP_364026.1 2629520-2629807 288 + ISxac3 transposase (fragment)-
13NA YP_364027.1 2629816-2630676 861 + ISxac3 transposase-
14NA YP_364028.1 2630792-2631196 405 + ISxac2 transposase-
15tRNA-Cys - 2631492-2631565 74 + tRNA-Cys-
16tRNA-Gly - 2631647-2631722 76 + tRNA-Gly-
17NA YP_364029.1 2631949-2633892 1944 + phage-related integrase-
18NA YP_364030.1 2633942-2634583 642 - LysR family transcriptional regulator-
19NA YP_364031.1 2634688-2634981 294 + hypothetical protein-
20NA YP_364032.1 2634988-2635878 891 - LysR family transcriptional regulator-
21NA YP_364033.1 2635915-2636238 324 - hypothetical protein-
22NA YP_364034.1 2636276-2637643 1368 - dihydrolipoamide dehydrogenase-
23NA YP_364035.1 2637684-2638490 807 - hypothetical protein-
24NA YP_364036.1 2638509-2639021 513 - hypothetical protein-
25dsbG YP_364037.1 2639117-2639890 774 - disulfide isomerase/thiol-disulfide oxidase-
26NA YP_364038.1 2639893-2640729 837 - thiol disulfide interchange protein-
27NA YP_364039.1 2640729-2642519 1791 - thiol:disulfide interchange protein-
28qseB YP_364040.1 2642714-2643382 669 + two-component system regulatory proteinVirulence
29qseC YP_364041.1 2643379-2644737 1359 + two-component system sensor protein-


tRNA-CystRNA-Gly