PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Pseudomonas fluorescens Pf0-1 (NC_007492)
Location : 3435573 - 3482943 bp
Size : 47371 bp
GC content : 58.2 %
GC bias (=GCregion - GCgenome) : -2.3 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_348722.1 3435573-3435833 261 + phage transcriptional regulator AlpA-
2NA YP_348723.1 3435838-3436680 843 + cobyrinic acid a,c-diamide synthase-
3NA YP_348724.1 3436986-3438572 1587 + hypothetical protein-
4NA YP_348725.1 3438569-3439117 549 + hypothetical protein-
5NA YP_348726.1 3439114-3440304 1191 + hypothetical protein-
6NA YP_348727.1 3440461-3441279 819 + hypothetical protein-
7NA YP_348728.1 3441276-3441794 519 + hypothetical protein-
8NA YP_348729.1 3441791-3442231 441 + single-stranded DNA-binding protein-
9NA YP_348730.1 3442472-3444439 1968 + DNA topoisomerase III-
10NA YP_348731.1 3444736-3444975 240 + hypothetical protein-
11NA YP_348732.1 3445343-3445936 594 + hypothetical protein-
12NA YP_348733.1 3446008-3446265 258 + hypothetical protein-
13NA YP_348734.1 3446366-3446860 495 + DNA repair protein RadCVirulence
14NA YP_348735.1 3446913-3447659 747 + hypothetical protein-
15NA YP_348736.1 3447766-3448308 543 + PilL protein-
16NA YP_348737.1 3448305-3448976 672 + hypothetical protein-
17NA YP_348738.1 3449049-3449705 657 + hypothetical protein-
18NA YP_348739.1 3449720-3450235 516 + lytic transglycosylase catalytic subunit-
19NA YP_348740.1 3450232-3450747 516 + hypothetical protein-
20NA YP_348741.1 3450757-3452862 2106 + hypothetical protein-
21NA YP_348742.1 3452953-3453684 732 + hypothetical protein-
22NA YP_348743.1 3453955-3454326 372 - hypothetical protein-
23NA YP_348744.1 3454633-3454968 336 + hypothetical protein-
24NA YP_348745.1 3454965-3455204 240 + hypothetical protein-
25NA YP_348746.1 3455222-3455593 372 + hypothetical protein-
26NA YP_348747.1 3455601-3456014 414 + hypothetical protein-
27NA YP_348748.1 3456011-3456652 642 + hypothetical protein-
28NA YP_348749.1 3456658-3457464 807 + hypothetical protein-
29NA YP_348750.1 3457454-3458968 1515 + hypothetical protein-
30NA YP_348751.1 3458970-3459347 378 + hypothetical protein-
31NA YP_348752.1 3459347-3462100 2754 + hypothetical protein-
32NA YP_348753.1 3462142-3462405 264 - hypothetical protein-
33NA YP_348754.1 3462569-3462823 255 + XRE family transcriptional regulator-
34NA YP_348755.1 3462929-3463885 957 + hypothetical protein-
35NA YP_348756.1 3463882-3465264 1383 + hypothetical protein-
36NA YP_348757.1 3465268-3465576 309 + hypothetical protein-
37NA YP_348758.1 3465587-3467131 1545 + hypothetical protein-
38NA YP_348759.1 3467704-3468297 594 - hypothetical protein-
39NA YP_348760.1 3468297-3469028 732 - hypothetical protein-
40NA YP_348761.1 3469469-3469807 339 + hypothetical protein-
41NA YP_348762.1 3469935-3470897 963 + DNA primase-
42NA YP_348763.1 3471454-3473181 1728 + hypothetical protein-
43NA YP_348764.1 3473290-3473502 213 - hypothetical protein-
44NA YP_348765.1 3473519-3473659 141 - hypothetical protein-
45NA YP_348766.1 3473891-3474946 1056 + fimbrial protein-
46NA YP_348767.1 3475040-3477850 2811 + periplasmic sensor hybrid histidine kinase-
47NA YP_348768.1 3477837-3479024 1188 + diguanylate phosphodiesterase-
48NA YP_348769.1 3479112-3482273 3162 + histidine kinase-
49NA YP_348770.1 3482296-3482943 648 + two component LuxR family transcriptional regulator-