PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pseudotuberculosis IP 32953 (NC_006155)
Location : 1910531 - 1949837 bp
Size : 39307 bp
GC content : 55.4 %
GC bias (=GCregion - GCgenome) : 7.75 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_070110.1 1910531-1911439 909 - polysaccharide deacetylase-
2NA YP_070111.1 1911989-1912684 696 + hypothetical protein-
3NA YP_070112.1 1912774-1913313 540 + hypothetical protein-
4NA YP_070113.1 1914026-1915048 1023 + transposase-
5NA YP_070114.1 1915048-1915827 780 + transposase/IS protein-
6NA YP_070115.1 1916227-1916436 210 - hypothetical protein-
7NA YP_070116.1 1916426-1916926 501 - hypothetical protein-
8NA YP_070117.1 1916992-1917177 186 - hypothetical protein-
9NA YP_070118.1 1917521-1918447 927 - hypothetical protein-
10fyuA YP_070119.1 1919320-1921341 2022 - OMR family pesticin/yersiniabactin receptor proteinVirulence
11ybtE YP_070120.1 1921472-1923049 1578 - yersiniabactin siderophore biosynthetic proteinVirulence
12ybtT YP_070121.1 1923053-1923841 789 - yersiniabactin biosynthetic protein YbtTVirulence
13ybtU YP_070122.1 1923853-1924953 1101 - yersiniabactin biosynthetic protein YbtUVirulence
14irp1 YP_070123.1 1924950-1934441 9492 - yersiniabactin biosynthetic proteinVirulence
15irp2 YP_070124.1 1934529-1940636 6108 - yersiniabactin biosynthetic proteinVirulence
16ybtA YP_070125.1 1940827-1941786 960 - transcriptional regulator YbtAVirulence
17ybtP YP_070126.1 1941953-1943755 1803 + lipoprotein inner membrane ABC-transporterVirulence
18ybtQ YP_070127.1 1943742-1945544 1803 + ABC transporter permeaseVirulence
19ybtX YP_070128.1 1945537-1946817 1281 + MFS superfamily transporter signal transducerVirulence
20ybtS YP_070129.1 1946845-1948149 1305 + salicylate synthase Irp9Virulence
21NA - 1948343-1949600 1258 - --
22tRNA-Asn - 1949762-1949837 76 - tRNA-Asn-


tRNA-Asn