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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Pseudomonas protegens Pf-5 (NC_004129) Location : 5378468 - 5447488 bp Size : 69021 bp GC content : 54.9 % GC bias (=GCregion - GCgenome) : -8.42 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | NA | - | 5378468-5378541 | 74 | - | - | - |
| 2 | tRNA-OTHER | - | 5378468-5378541 | 74 | - | tRNA-OTHER | - |
| 3 | NA | YP_004842363.1 | 5378616-5379488 | 873 | + | hypothetical protein | - |
| 4 | NA | YP_261742.1 | 5379490-5380242 | 753 | + | hypothetical protein | - |
| 5 | NA | YP_261743.1 | 5380239-5380622 | 384 | + | hypothetical protein | - |
| 6 | NA | YP_261744.1 | 5381181-5381870 | 690 | + | hypothetical protein | - |
| 7 | NA | YP_261745.1 | 5381933-5382538 | 606 | + | hypothetical protein | - |
| 8 | dnaB_1 | YP_261746.1 | 5382535-5383884 | 1350 | + | replicative DNA helicase | - |
| 9 | NA | YP_261747.1 | 5384059-5384577 | 519 | + | hypothetical protein | - |
| 10 | ndpA_2 | YP_261748.2 | 5384800-5385801 | 1002 | + | nucleoid-associated protein NdpA | - |
| 11 | NA | YP_004842364.1 | 5385798-5386145 | 348 | + | Arc-like DNA binding domain-containing protein | - |
| 12 | NA | YP_261749.1 | 5386147-5387820 | 1674 | + | hypothetical protein | - |
| 13 | NA | YP_261750.1 | 5387862-5388488 | 627 | + | hypothetical protein | - |
| 14 | NA | YP_261751.1 | 5388485-5389765 | 1281 | + | hypothetical protein | - |
| 15 | NA | YP_261752.1 | 5390321-5391052 | 732 | + | integrating conjugative element protein | - |
| 16 | NA | YP_261753.1 | 5391049-5391594 | 546 | + | hypothetical protein | - |
| 17 | NA | YP_261754.1 | 5391609-5392115 | 507 | + | single-stranded DNA-binding protein | - |
| 18 | topA_2 | YP_261755.1 | 5393086-5395002 | 1917 | + | DNA topoisomerase I | - |
| 19 | NA | YP_261756.1 | 5395092-5396972 | 1881 | + | hypothetical protein | - |
| 20 | NA | YP_261757.1 | 5396984-5398936 | 1953 | + | helicase | - |
| 21 | pilL | YP_261758.1 | 5399717-5400862 | 1146 | + | type IV pilus biogenesis protein PilL | Virulence |
| 22 | pilN | YP_261759.1 | 5400859-5402700 | 1842 | + | type IV pilus protein, PilN | Virulence |
| 23 | pilO_1 | YP_261760.1 | 5402711-5404045 | 1335 | + | type IV pilus biogenesis protein PilO | - |
| 24 | pilP_2 | YP_004842365.1 | 5404035-5404565 | 531 | + | type IV pilus biogenesis protein PilP | - |
| 25 | pilQ | YP_261761.1 | 5404562-5406094 | 1533 | + | pilus assembly protein PilQ | Virulence |
| 26 | NA | YP_261762.1 | 5406087-5407253 | 1167 | + | type IV pilus biogenesis protein | Virulence |
| 27 | pilS | YP_261763.1 | 5407275-5407790 | 516 | + | type IV pilus biogenesis protein PilS | Virulence |
| 28 | NA | YP_261764.2 | 5407811-5408752 | 942 | + | twitching motility protein | Virulence |
| 29 | pilV | YP_261765.1 | 5408742-5409953 | 1212 | + | type IV pilus biogenesis protein PilV | Virulence |
| 30 | NA | YP_261766.1 | 5409968-5410408 | 441 | + | pilM protein | Virulence |
| 31 | NA | YP_261767.1 | 5412717-5413166 | 450 | + | hypothetical protein | - |
| 32 | NA | YP_261768.1 | 5414388-5414708 | 321 | + | hypothetical protein | - |
| 33 | NA | YP_261769.1 | 5415056-5415187 | 132 | + | hypothetical protein | - |
| 34 | NA | YP_261770.2 | 5415250-5415855 | 606 | + | hypothetical protein | - |
| 35 | NA | YP_261771.1 | 5415949-5416203 | 255 | + | hypothetical protein | - |
| 36 | NA | YP_004842366.1 | 5416257-5416871 | 615 | + | hypothetical protein | - |
| 37 | NA | YP_261772.1 | 5416895-5418334 | 1440 | + | hypothetical protein | - |
| 38 | NA | YP_261773.1 | 5418420-5420669 | 2250 | + | hypothetical protein | - |
| 39 | rulA | YP_261774.2 | 5420936-5421361 | 426 | + | ultraviolet light resistance protein RulA | - |
| 40 | rulB | YP_261775.1 | 5421354-5422625 | 1272 | + | ultraviolet light resistance protein RulB | - |
| 41 | NA | YP_004842367.1 | 5422735-5423430 | 696 | + | hypothetical protein | - |
| 42 | NA | YP_261776.1 | 5423444-5424187 | 744 | + | integrating conjugative element protein | - |
| 43 | NA | YP_261777.1 | 5424172-5424723 | 552 | + | hypothetical protein | - |
| 44 | NA | YP_261778.1 | 5424720-5425226 | 507 | + | integrating conjugative element protein | - |
| 45 | traD | YP_261779.1 | 5425475-5427691 | 2217 | + | conjugative coupling factor TraD | - |
| 46 | NA | YP_261780.1 | 5427701-5428450 | 750 | + | integrating conjugative element membrane protein | - |
| 47 | NA | YP_261781.1 | 5428460-5429920 | 1461 | + | hypothetical protein | - |
| 48 | NA | YP_261782.1 | 5429936-5430238 | 303 | + | hypothetical protein | - |
| 49 | NA | YP_261783.1 | 5430458-5430811 | 354 | + | integrative conjugative element protein | - |
| 50 | NA | YP_261784.1 | 5430808-5431047 | 240 | + | integrating conjugative element protein | - |
| 51 | NA | YP_261785.1 | 5431062-5431400 | 339 | + | integrating conjugative element membrane protein | - |
| 52 | NA | YP_004842368.1 | 5431416-5431784 | 369 | + | conjugative transfer region protein | - |
| 53 | NA | YP_261786.1 | 5431796-5432440 | 645 | + | integrating conjugative element protein | - |
| 54 | NA | YP_261787.1 | 5432437-5433348 | 912 | + | integrating conjugative element protein | - |
| 55 | NA | YP_261788.1 | 5433332-5434828 | 1497 | + | integrating conjugative element protein | - |
| 56 | NA | YP_004842369.1 | 5434806-5435243 | 438 | + | conjugative transfer region lipoprotein | - |
| 57 | NA | YP_261789.1 | 5435245-5438169 | 2925 | + | conjugative transfer ATPase | - |
| 58 | NA | YP_261790.1 | 5438166-5438471 | 306 | + | hypothetical protein | - |
| 59 | NA | YP_261791.1 | 5438468-5439127 | 660 | + | thioredoxin | - |
| 60 | NA | YP_261792.1 | 5441688-5442116 | 429 | + | integrating conjugative element protein | - |
| 61 | NA | YP_261793.1 | 5442113-5443051 | 939 | + | integrating conjugative element protein | - |
| 62 | NA | YP_261794.2 | 5443072-5444424 | 1353 | + | integrating conjugative element protein | - |
| 63 | NA | YP_261795.1 | 5444784-5446316 | 1533 | + | hypothetical protein | - |
| 64 | NA | YP_261796.1 | 5446848-5447126 | 279 | + | addiction module antidote protein | - |
| 65 | NA | YP_004842370.1 | 5447123-5447488 | 366 | + | plasmid stabilization system protein, RelE/ParE family | - |