PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Pseudomonas protegens Pf-5 (NC_004129)
Location : 1855859 - 1866512 bp
Size : 10654 bp
GC content : 56.1 %
GC bias (=GCregion - GCgenome) : -7.23 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_258781.1 1855859-1856980 1122 + DegT/DnrJ/EryC1/StrS family aminotransferase-
2NA YP_258782.1 1857063-1857284 222 + hypothetical protein-
3NA YP_258783.1 1857290-1858330 1041 + 3-oxoacyl-ACP synthase-
4NA YP_258784.1 1858330-1859151 822 + short chain dehydrogenase/reductase family oxidoreductase-
5NA YP_258785.1 1859168-1859806 639 + transferase-
6NA YP_258786.1 1859840-1860982 1143 + Rieske (2Fe-2S) domain-containing protein-
7NA YP_258787.1 1860979-1861599 621 + hypothetical protein-
8NA YP_258788.1 1861658-1862893 1236 + FkbM family methyltransferase-
9NA YP_258789.1 1862994-1866512 3519 + group 2 family glycosyltransferaseVirulence