PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pestis KIM (NC_004088)
Location : 2644393 - 2681253 bp
Size : 36861 bp
GC content : 56.2 %
GC bias (=GCregion - GCgenome) : 8.52 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA NP_669699.1 2644393-2645133 741 + pilin chaperone-
2tRNA-Asn - 2645436-2645508 73 + tRNA-Asn-
3NA NP_669700.1 2645673-2646935 1263 + prophage integrase-
4ybtS NP_669701.1 2647129-2648433 1305 - salicylate synthase Irp9Virulence
5ybtX NP_669702.1 2648461-2649864 1404 - hypothetical proteinVirulence
6ybtQ NP_669703.1 2649734-2651536 1803 - permease and ATP-binding protein of yersiniabactin-iron ABC transporterVirulence
7ybtP NP_669704.1 2651523-2653325 1803 - permease and ATP-binding protein of yersiniabactin-iron ABC transporterVirulence
8ybtA NP_669705.1 2653492-2654451 960 + AraC family transcriptional regulatorVirulence
9irp2 NP_669706.1 2654642-2660749 6108 + HMWP2 nonribosomal peptide synthetaseVirulence
10irp1 NP_669707.1 2660837-2670328 9492 + HMWP1 nonribosomal peptide/polyketide synthaseVirulence
11ybtU NP_669708.2 2670325-2671425 1101 + thiazolinyl-S-HMWP1 reductaseVirulence
12ybtT NP_669709.2 2671437-2672225 789 + yersiniabactin thioesteraseVirulence
13ybtE NP_669710.1 2672229-2673806 1578 + salicyl-AMP ligaseVirulence
14psn NP_669711.1 2673937-2675958 2022 + pesticin/yersiniabactin outer membrane receptorVirulence
15NA NP_669712.1 2676774-2677196 423 + hypothetical proteinVirulence
16NA NP_669713.1 2677204-2677758 555 + hypothetical protein-
17NA NP_669714.1 2678272-2678853 582 + hypothetical protein-
18NA NP_669715.1 2678843-2679052 210 + hypothetical protein-
19NA NP_669716.1 2679295-2679408 114 + hypothetical protein-
20NA NP_669717.1 2679452-2680234 783 - transposase/IS protein-
21NA NP_669718.1 2680231-2681253 1023 - transposase-


tRNA-Asn