PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pestis CO92 (NC_003143)
Location : 2134882 - 2172405 bp
Size : 37524 bp
GC content : 56.0 %
GC bias (=GCregion - GCgenome) : 8.38 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_002346888.1 2134882-2135067 186 - hypothetical protein-
2NA - 2134922-2134946 25 + --
3NA - 2135459-2135486 28 + --
4y1093 YP_002346890.1 2135545-2136567 1023 + transposase for insertion sequence IS100-
5NA YP_002346891.1 2136564-2137346 783 + transposase/IS protein-
6NA - 2137385-2137412 28 - --
7NA YP_002346892.1 2137945-2138526 582 - hypothetical protein-
8NA YP_002346893.1 2138532-2138696 165 - hypothetical protein-
9NA YP_002346894.1 2138715-2138996 282 - transcriptional regulator-
10NA - 2139040-2139967 928 - --
11fyuA YP_002346897.1 2140840-2142861 2022 - pesticin/yersiniabactin receptor proteinVirulence
12irp5 YP_002346898.1 2142992-2144569 1578 - yersiniabactin siderophore biosynthetic proteinVirulence
13irp4 YP_002346899.1 2144573-2145376 804 - yersiniabactin biosynthetic protein YbtTVirulence
14irp3 YP_002346900.1 2145373-2146473 1101 - yersiniabactin biosynthetic protein YbtUVirulence
15irp1 YP_002346901.1 2146470-2155961 9492 - yersiniabactin biosynthetic proteinVirulence
16irp2 YP_002346902.1 2156049-2162156 6108 - yersiniabactin biosynthetic proteinVirulence
17ybtA YP_002346903.1 2162347-2163306 960 - transcriptional regulator YbtAVirulence
18irp6 YP_002346904.1 2163473-2165275 1803 + lipoprotein inner membrane ABC transporterVirulence
19irp7 YP_002346905.1 2165262-2167064 1803 + ABC transporter permeaseVirulence
20irp8 YP_002346906.1 2167057-2168337 1281 + signal transducerVirulence
21ybtS YP_002346907.1 2168365-2169669 1305 + salicylate synthase Irp9Virulence
22int YP_002346908.1 2169863-2171125 1263 - integrase-
23NA - 2171284-2171307 24 + --
24tRNA-Asn - 2171287-2171362 76 - tRNA-Asn-
25NA YP_002346909.1 2171665-2172405 741 - pili assembly chaperone-


NANA NA NAtRNA-Asn