Genome Information

PAthogenisity Island DataBase (PAI DB)

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Genome Information

• General information

Accession:

Strain :

Acinetobacter baumannii

Type :

Size :

G+C content :

[Note]

• PAIs (PAI reported to be located in this genome)

• cPAIs (PAI-like region overlapping genomic islands (candidate PAI))

*

No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of PAI-virulence genes	PAIs homologous to this region
1	254818	373231	118414	117	39.66 %	6	AbaR1 (Acinetobacter baumannii AYE) AbaR11 (Acinetobacter baumannii NIPH470) AbaR25 (Acinetobacter baumannii K51-65) delta-AbaR25 (Acinetobacter baumannii K51-74) AbaR4a (Acinetobacter baumannii LT-3) AbaR25 (Acinetobacter baumannii BJAB07104) AbaR26 (Acinetobacter baumannii BJAB0868) AbaR22 (Acinetobacter baumannii MDR-ZJ06) AbaR4d (Acinetobacter baumannii 1656-2) Tn6166 (Acinetobacter baumannii RUH134) Tn6167 (Acinetobacter baumannii A91) AbaR4 (Acinetobacter baumannii D36) AbaR5 (Acinetobacter baumannii 3208) AbaR4e (Acinetobacter baumannii TCDC-AB0715) Not named (Escherichia coli EC20020119) ICEPmu1 (Pasteurella multocida 36950) SGI1 (Proteus mirabilis PmVER) SGI1 (Proteus mirabilis PmGUE) SGI1 (Salmonella enterica SRC73)
2	1339216	1348908	9693	17	56.78 %	1	AbaR1 (Acinetobacter baumannii AYE) AbaR20 (Acinetobacter baumannii ACICU) AbaR26 (Acinetobacter baumannii D30) AbGRI2-1 (Acinetobacter baumannii WM99c) AbaR5 (Acinetobacter baumannii 3208) AbaR4e (Acinetobacter baumannii TCDC-AB0715) Tn2411 (Escherichia coli 42) Tn5036-like (Klebsiella pneumoniae 12836) SGI1 (Proteus mirabilis PmBRI) SGI1 (Proteus mirabilis PmCAU) SGI1 (Proteus mirabilis PmSCO) SGI1 (Proteus mirabilis PmMAT) SGI1 (Proteus mirabilis PmABB) SGI1 (Proteus mirabilis PmVER) SGI1 (Proteus mirabilis PmGUE) Tn6060 (Pseudomonas aeruginosa 37308) PAGI-2 (Pseudomonas aeruginosa U6) PAGI-2(C) (Pseudomonas aeruginosa U09) SGI1 (Salmonella enterica DT104) SGI1 (Salmonella enterica SRC73) SGI2 (Salmonella enterica SRC19)

• nPAIs (PAI-like region not overlapping genomic islands (non-probable PAI))

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• REIs (REI reported to be located in this genome)

No	Name	Start	End	Size(bp)	Insertion Site	Function
1	AbaR22	256337	295286	38950	-	Tetracycline efflex pump, streptomyces resistance, sul1 resistance gene

• cREIs (REI-like region overlapping genomic islands (candidate REI))

*

• nREIs (REI-like region not overlapping genomic islands (non-probable REI))

*

No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of REI-resistance genes	REIs homologous to this region
1	2051806	2060139	8334	10	36.11 %	1	AbaR8 (Acinetobacter baumannii D13) AbaR4b (Acinetobacter baumannii LT-11) AbaR6 (Acinetobacter baumannii D2) AbaR25 (Acinetobacter baumannii BJAB07104) AbaR27 (Acinetobacter baumannii BJAB0715) AbaR26 (Acinetobacter baumannii BJAB0868) AbaR4d (Acinetobacter baumannii 1656-2) AbaR4 (Acinetobacter baumannii D36)