Genome Information

PAthogenisity Island DataBase (PAI DB)

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Genome Information

• General information

Accession:

Strain :

Xanthomonas campestris

Type :

Size :

G+C content :

[Note]

• PAIs (PAI reported to be located in this genome)

No	Name	Start	End	Size(bp)	Insertion Site	Function
1	Hrp PAI	3596348	3619441	23094	-	Type III secretion system (hrp,hrc), hpa (hrp-associated)

• cPAIs (PAI-like region overlapping genomic islands (candidate PAI))

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No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of PAI-virulence genes	PAIs homologous to this region
1	2435115	2486282	51168	52	63.42 %	1	ICEPmu1 (Pasteurella multocida 36950) Not named (Proteus mirabilis HI4320) PAPI-1 (Pseudomonas aeruginosa PA14) ExoU island A (Pseudomonas aeruginosa 6077) PAGI-2(C) (Pseudomonas aeruginosa C) PAGI-3(SG) (Pseudomonas aeruginosa SG17M) PAGI-5 (Pseudomonas aeruginosa PSE9) PPHGI-1 (Pseudomonas syringae 1302A) SPI-7 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-7 (Salmonella enterica subsp. enterica serovar Typhi Ty2) YAPI (Yersinia pseudotuberculosis 32777) YAPI (Yersinia enterocolitica 8081) YAPI (Yersinia pseudotuberculosis IP 31758)
2	3596348	3619441	23094	25	63.22 %	25	Hrp PAI (Xanthomonas axonopodis 8ra) Hrp PAI (Xanthomonas euvesicatoria Mar-75) Hrp PAI (Xanthomonas oryzae PXO86) Hrp PAI (Xanthomonas oryzae MAFF 311018) Hrp PAI (Xanthomonas campestris pv. campestris str. ATCC 33913) Hrp PAI (Xanthomonas axonopodis pv. citri str. 306) Hrp PAI (Xanthomonas oryzae pv. oryzae KACC10331) Hrp PAI (Xanthomonas campestris pv. campestris str. 8004) Hrp PAI (Xanthomonas campestris pv. vesicatoria str. 85-10)

• nPAIs (PAI-like region not overlapping genomic islands (non-probable PAI))

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• REIs (REI reported to be located in this genome)

• cREIs (REI-like region overlapping genomic islands (candidate REI))

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• nREIs (REI-like region not overlapping genomic islands (non-probable REI))

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