Genome Information

PAthogenisity Island DataBase (PAI DB)

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Genome Information

• General information

Accession:

Strain :

Pseudomonas syringae

Type :

Size :

G+C content :

[Note]

• PAIs (PAI reported to be located in this genome)

• cPAIs (PAI-like region overlapping genomic islands (candidate PAI))

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No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of PAI-virulence genes	PAIs homologous to this region
1	1329470	1396849	67380	66	58.27 %	34	Hrp PAI (Erwinia amylovora 321) Not named (Pseudomonas sp. KD) S-PAI (Pseudomonas cichorii Jan-83) Hrp PAI (Pseudomonas syringae DC3000) Hrp PAI (Pseudomonas syringae 61) Hrp PAI (Pseudomonas syringae Race 4) Hrp PAI (Pseudomonas syringae Pss61) Hrp PAI (Pseudomonas syringae B728a) Hrp PAI (Pseudomonas syringae pv. tomato DC3000) T-PAI (Pseudomonas viridiflava RMX23.1a) T-PAI (Pseudomonas viridiflava ME3.1b) T-PAI (Pseudomonas viridiflava RMX3.1b) T-PAI (Pseudomonas viridiflava LP23.1a) T-PAI (Pseudomonas viridiflava PNA3.3a) S-PAI (Pseudomonas viridiflava RMX23.1a) S-PAI (Pseudomonas viridiflava ME3.1b) S-PAI (Pseudomonas viridiflava RMX3.1b)
2	1694121	1724033	29913	27	55.57 %	8	PAPI-1 (Pseudomonas aeruginosa PA14) PAGI-2(C) (Pseudomonas aeruginosa C) PAGI-3(SG) (Pseudomonas aeruginosa SG17M) PAGI-5 (Pseudomonas aeruginosa PSE9) PPHGI-1 (Pseudomonas syringae 1302A)

• nPAIs (PAI-like region not overlapping genomic islands (non-probable PAI))

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• REIs (REI reported to be located in this genome)

• cREIs (REI-like region overlapping genomic islands (candidate REI))

*

• nREIs (REI-like region not overlapping genomic islands (non-probable REI))

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No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of REI-resistance genes	REIs homologous to this region
1	908947	918202	9256	11	58.64 %	6	TAI (Escherichia coli O157:H7 EDL933) TAI (Escherichia coli O157:H7 EDL933) Tn6060 (Pseudomonas aeruginosa 37308)